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v1.1.0 Release#760

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ddobie merged 154 commits intomasteraskap-vast/vast-pipeline:masterfrom release-v1.1.0askap-vast/vast-pipeline:release-v1.1.0Copy head branch name to clipboardOct 13, 2024

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Commits on May 19, 2021

• optionally add pipeline run to django Image, as a separate function call

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Commits on May 20, 2021

• remove redundant code

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• Removed dependence of SelavyImage on full PipelineConfig object. Instead, only pass relevant options required for image ingestion

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• moved writing of parquet files to separate function

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• Removed dependence of make_upload_images() on the pipeline config, by writing parquet files outside of the function

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• Added custom django command for ingesting images. It requires a config file that is a subset of the full config options for a pipeline run

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• Added custom command for generating a template image ingest config

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Commits on May 21, 2021

• docstring

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• Associate the pipelun run with each image outside of make_upload_images()

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• Merge branch 'release-v1.0.0' into dev

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• set versions to dev

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Commits on May 24, 2021

• update install link in README

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• add site_url to mkdocs config

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• updated CHANGELOG

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Commits on May 25, 2021

• added TraP acknowledgement

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• Merge pull request #543 from askap-vast/issue-541-542-fix-docs

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Commits on Jun 3, 2021

• Merge branch 'dev' into separate-image-ingestion-#375

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• renamed command

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• remove unused imports

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• add linter to CICD

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• removed trailing whitespaces and fixed no newlines at end of file. Also added both to CICD

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• remove unused import

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Commits on Jun 4, 2021

• Merge pull request #546 from askap-vast/unused-imports-#545

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• Merge branch 'dev' into separate-image-ingestion-#375

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• only read .env if required vars are undefined (#548)

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Commits on Jun 8, 2021

• Merge branch 'dev' into separate-image-ingestion-#375

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• Updated changelog

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• updated changelog [skip ci]

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Commits on Jun 9, 2021

• Merge pull request #550 from askap-vast/fix-#549-missing-changelog

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• Merge branch 'dev' into separate-image-ingestion-#375

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Commits on Jun 21, 2021

• Catch pipeline config error and raise django command error

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• Remove unnecessary "source_monitoring" option from image ingest config

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• Make it clear which config options are only used when ingesting NEW images

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• Added comments to ingest command

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• Make it clear in the web form which config options are only used when ingesting NEW images

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• Added docs for initingest and ingestimages commands

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• Add doc strings for new commands

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• bugfix: value required for source_monitoring.monitor during config validation.

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• updated changelog [skip ci]

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• catch KeyError during validate when checking for source_monitoring, instead of appending the key after the ingest config has been read

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Commits on Jun 24, 2021

• added processing spinner to source query table (#551)

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• compute ideal source coverage with astropy xmatch (#555)

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Commits on Jun 25, 2021

• fix broken docs link

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• doc fixes

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• Merge remote-tracking branch 'origin/dev' into separate-image-ingestion-#375

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• enforce .yml extension on image config files

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• added HOME_DATA_ROOT setting (#559)

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• Add TNS external search for sources (#557)

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Commits on Jun 28, 2021

• Merge remote-tracking branch 'origin/dev' into separate-image-ingestion-#375

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• Merge pull request #544 from askap-vast/separate-image-ingestion-#375

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Commits on Jun 29, 2021

• fixed launch run user permission bug (#563)

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Commits on Jul 23, 2021

• fixed pandas=1.3.0 groupby sum regression (#567)

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• Bump prismjs from 1.23.0 to 1.24.0 (#561)

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• added support for reading selavy VOTables and CSVs (#565)

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Commits on Aug 11, 2021

• Removed timezone from measurements arrow file time column

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Commits on Sep 8, 2021

• Fixed UI re-run from errored status

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• Reverted comment in file.

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• Moved creation of backup output files

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Commits on Oct 8, 2021

• Merge pull request #571 from askap-vast/iss570-remove-arrow-timezone

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• Added required data page to documentation (#572)

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• Fixed d2d assignment in advanced association (#574)

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• Merge branch 'dev' into iss575-fix-ui-rerun-error-logic

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• Merge pull request #576 from askap-vast/iss575-fix-ui-rerun-error-logic

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• Added UI run action buttons (#580)

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Commits on Oct 12, 2021

• remove unique constraint from Measurement.name (#583)

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Commits on Nov 26, 2021

• Clean up m2m related objects when deleting a run (#585)

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Commits on Dec 1, 2021

• change cutout endpoint to use measurement ID (#588)

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Commits on Dec 2, 2021

• expose django-q timeout and retry to env vars (#589)

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Commits on Dec 17, 2021

• Remove MeasurementPair model (#590)

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Commits on Jan 12, 2022

• Fixed restore run forced measurements associations (#600)

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Commits on Jan 14, 2022

• Add date and time stamp to log files (#595)

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Commits on Feb 2, 2022

• Bump ipython from 7.30.0 to 7.31.1 (#604)

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• Bump pillow from 8.4.0 to 9.0.0 (#601)

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• Bump jszip from 3.5.0 to 3.7.0 (#591)

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Commits on Feb 3, 2022

• Add an eta-v analysis page for the source query (#586)

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Commits on Feb 4, 2022

• add pip install wheel and format (#611)

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• Bump prismjs from 1.24.0 to 1.25.0

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• Update detail page titles (#597)

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• Bump copy-props from 2.0.4 to 2.0.5

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• Bump postcss from 7.0.35 to 7.0.39

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• Bump follow-redirects from 1.14.1 to 1.14.7

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• Merge pull request #581 from askap-vast/dependabot/npm_and_yarn/prismjs-1.25.0

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• Merge pull request #606 from askap-vast/dependabot/npm_and_yarn/copy-props-2.0.5

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• Merge pull request #607 from askap-vast/dependabot/npm_and_yarn/postcss-7.0.39

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• Merge pull request #608 from askap-vast/dependabot/npm_and_yarn/follow-redirects-1.14.7

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Commits on Feb 9, 2022

• Refactored add to favourites button to avoid refresh (#614)

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Commits on Feb 10, 2022

• added error handling to external queries (#616)

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Commits on Feb 14, 2022

• fixed NED links (#623)

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• Updated Aladin VAST surveys (#622)

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• Updated dependencies with npm audit fix (#620)

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• Pair metrics hover tooltip (#625)

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• Produce IAU compliant source names (#618)

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Commits on Feb 23, 2022

• Add a ZTF cone search link (#626)

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• bump jinja2 to v3 (#634)

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• skip empty groups in new sources groupby-apply (#632)

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• URI encode NED object names (#633)

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Commits on Mar 3, 2022

• Documentation update and versioning (#627)

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• Remove excessive measurement tables (#636)

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• Fix dev docs workflow

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• Fix empty groups in parallel association (#642)

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• Addressed pandas DataFrame.append deprecation (#643)

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• Drop Python 3.7 and dependency refresh (#641)

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• Support defer loading of dataTables data (#638)

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• Added github user to ci-docs workflows

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Commits on Mar 29, 2022

• Fix astroquery Ned import deprecation (#644)

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Commits on Apr 7, 2022

• Bump bokeh 2.4.2 (#652)

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Commits on Apr 8, 2022

• Allow forced fitting on images with empty catalogues (#653)

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Commits on Apr 11, 2022

• make Image and Measurement creation atomic together (#648)

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Commits on Apr 22, 2022

• Add run config option to disable measurement pairs (#655)

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• Bump django from 3.2.12 to 3.2.13

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Commits on Apr 26, 2022

• Add MAX_CUTOUT_IMAGES setting (#658)

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• Merge pull request #656 from askap-vast/dependabot/pip/django-3.2.13

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Commits on Nov 22, 2022

• Update Gr1N/setup-poetry to v7 (#665)

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Commits on Jan 25, 2023

• Removed home counts and new source counts

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• Update CHANGELOG.md

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• Update docs page and image

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• Merge pull request #676 from askap-vast/iss605-remove-home-counts

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Commits on May 16, 2023

• Updated runpipeline section on CLI docs (#685)

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Commits on Sep 6, 2023

• Added source page buttons for Fink and Data Central DAS (#697)

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Commits on Dec 7, 2023

• Add new regression data download method and update github actions ubuntu version (#699)

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Commits on Dec 9, 2023

• Update Gr1N poetry to v8, force python 3.8.10 (#701)

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• Downgrade ci-docs to python 3.8 (#702)

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Commits on Dec 12, 2023

• Correctly handle compressed fits files (#694)

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Commits on Jul 12, 2024

• Implement sensible partitioning (#724)

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• Fix excess memory usage in django upload (#726)

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Commits on Jul 18, 2024

• Fix new sources merge memory leak (#730)

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• Fixed incorrect PR number in changelog (#731)

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Commits on Aug 7, 2024

• Updated docker compose syntax in github actions (#736)

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Commits on Aug 8, 2024

• Fix pytest github action breaking for python 3.9 (#728)

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Commits on Aug 9, 2024

• Fix docs deployment (#741)

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• Add support for python 3.10 (#740)

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• Add benchmarking logging (#725)

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Commits on Aug 13, 2024

• Update README.md

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• Update URLs in docs

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Commits on Aug 14, 2024

• Updated Nimbus badge in README.md to point to the correct pipeline URL

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Commits on Aug 19, 2024

• Update poetry.lock

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• Update README.md

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Commits on Aug 20, 2024

• Merge pull request #742 from askap-vast/doc_updates

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Commits on Sep 19, 2024

• Drop all pixels <=0 before calculating statistics.

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• Add debug logs showing min,max,median values derived from the RMS image

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Commits on Sep 20, 2024

• Read config inputs once upfront into a dictionary and write modified dictionary to YAML

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• Read inputs dict from YAML up-front in PipelineConfig.validation method

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• Simplify number of files calculations in PipelineConfig.validate

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• Remove further repeated calls to config['inputs']

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• Merge pull request #754 from askap-vast/fix_751_yaml_config

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• Fix dumb broken logic I introduced.

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• Merge branch 'dev' into fix_753_rms_calc

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• Update CHANGELOG.md

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• Merge pull request #755 from askap-vast/fix_753_rms_calc

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• v1.1.0 release attempt 1 changes

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