0.39.4

🏎 Performance

• Remove size comparison check when uploading Zarr entries #986 (@jwodder)

Authors: 1

• John T. Wodder II (@jwodder)

0.39.3

🐛 Bug Fix

• Increase Zarr depth limit to 7 directories #984 (@jwodder)
• keeping logs cleaner in dedicated directory #971 (@TheChymera)
• performance: do not duplicate schema loading #982 (@TheChymera)
• Strip trailing slash from URLs in /server-info #972 (@jwodder)

🏠 Internal

• Add new API design doc #447 (@jwodder)

🧪 Tests

• Removed duplicate, and simplified bids validator tests #965 (@TheChymera)
• Mark test_server_info as xfailing #978 (@jwodder)
• Mark test_parse_dandi_url_not_found as xfailing #973 (@jwodder)
• Update test_parse_api_url[DANDI:000027] #974 (@jwodder)
• Update test_follow_redirect #975 (@jwodder)
• Combine subtests of test_publish_and_manipulate #964 (@jwodder)

Authors: 2

• Horea Christian (@TheChymera)
• John T. Wodder II (@jwodder)

0.39.2

🐛 Bug Fix

• Validator fixes: fallback to our version, skip dotdirs on windows, etc #955 (@TheChymera)
• Better detection of empty directories when download-syncing Zarrs #961 (@jwodder)

Authors: 2

• Horea Christian (@TheChymera)
• John T. Wodder II (@jwodder)

0.39.1

🐛 Bug Fix

• Fix type in test docker-compose env var #960 (@AlmightyYakob)

Authors: 1

• Jacob Nesbitt (@AlmightyYakob)

0.39.0

🚀 Enhancement

• Add DANDI_JUPYTERHUB_URL to test docker-compose #959 (@AlmightyYakob)
• Integrate NWBInspector with DANDI validation #941 (@CodyCBakerPhD)

🐛 Bug Fix

• Integration test config #957 (@dchiquito)
• Smaller video files #947 (@TheChymera)

⚠️ Pushed to master

• add .mkv as a valid video extension (@bendichter)

🏠 Internal

• DX: enable "released" plugin for auto #951 (@yarikoptic)

🧪 Tests

• Fixed test_write_report() log path issue #954 (@TheChymera)
• Specify all queues in test celery worker #953 (@dchiquito)
• Work around a bug in docker-compose #949 (@jwodder)

Authors: 7

• Ben Dichter (@bendichter)
• Cody Baker (@CodyCBakerPhD)
• Daniel Chiquito (@dchiquito)
• Horea Christian (@TheChymera)
• Jacob Nesbitt (@AlmightyYakob)
• John T. Wodder II (@jwodder)
• Yaroslav Halchenko (@yarikoptic)

0.38.0

🚀 Enhancement

• Adding BIDS support #896 (@yarikoptic @TheChymera)

🏠 Internal

• Black update #945 (@TheChymera)

Authors: 2

• Horea Christian (@TheChymera)
• Yaroslav Halchenko (@yarikoptic)

0.37.0

🚀 Enhancement

• Recognize video files as non-generic assets #922 (@jwodder)

🐛 Bug Fix

• Update for change in Zarr checksum format #933 (@jwodder)
• Trigger Zarr ingestion after performing an upload #938 (@jwodder)
• check for existence of video path else assume relative path #931 (@Saksham20)
• dandi upload: Make --jobs default to 5:5 and document it #940 (@jwodder)
• checking for duplicate video files in external_files #928 (@Saksham20)
• skip handling URLs in external files references as we do for local paths #932 (@Saksham20)
• Let dandi delete take paths to local Zarrs #925 (@jwodder)

🏎 Performance

• Minimize/optimize Zarr digestion when uploading #923 (@jwodder)
• Don't repeat API requests when finding subdir files to delete before Zarr upload #919 (@jwodder)

📝 Documentation

• Correct the docstring for BasePath.parents #936 (@jwodder)

Authors: 2

• John T. Wodder II (@jwodder)
• Saksham Sharda (@Saksham20)

0.36.0

🚀 Enhancement

• Add zarr-checksum method to dandi digest #900 (@jwodder)
• Move dandi organize code to an organize() function #902 (@jwodder)
• Video files organize #841 (@Saksham20)
• Make use of /assets/{asset_id}/info/ endpoint #895 (@jwodder)
• Support Zarr directories #853 (@jwodder)

🐛 Bug Fix

• Make dandi upload look for dandiset.yaml in parents of common path #916 (@jwodder)
• Mint Zarr assets at start of upload and sync Zarr contents #907 (@jwodder)
• Use full asset path as name of Zarr object #912 (@jwodder)
• Specify Dandiset ID when creating a Zarr #911 (@jwodder)
• Cancel a Zarr upload if an error occurs partway through #893 (@jwodder)
• Make get_raw_digest() actually default to the proper digest type for Zarrs #894 (@jwodder)
• Fix neural data type to metadata extractor #891 (@satra @yarikoptic)

🏠 Internal

• Add dedicated HTTP404Error exception class #908 (@jwodder)
• Make paths argument to upload() optional #899 (@jwodder)
• Add type-annotations to various files #887 (@jwodder)
• Delete functions (get_asset_metadata, find_dandi_files) obsoleted by PR #853 #885 (@jwodder)
• Use a pydantic model to store a RemoteDandiset's cached data #876 (@jwodder)

📝 Documentation

• improve DandiApiClient.init docstring #909 (@bendichter)
• Document new dandi organize options in Read the Docs site #901 (@jwodder)
• Organize & fine-tune dandi.dandiapi Sphinx docs #888 (@jwodder)

🧪 Tests

• Pin minio image version #898 (@AlmightyYakob)
• Enable type-checking #877 (@jwodder)
• Add new_dandiset fixture #874 (@jwodder)
• Mark a test with missing skipif_no_network marker #886 (@jwodder)

🔩 Dependency Updates

• Remove unused tqdm dependency #910 (@jwodder)
• Update minimum pydantic version to 1.9.0 #905 (@jwodder)

Authors: 6

• Ben Dichter (@bendichter)
• Jacob Nesbitt (@AlmightyYakob)
• John T. Wodder II (@jwodder)
• Saksham Sharda (@Saksham20)
• Satrajit Ghosh (@satra)
• Yaroslav Halchenko (@yarikoptic)

0.35.0

🚀 Enhancement

• Make navigate() and navigate_url() auto-authenticate for embargoed Dandisets #870 (@jwodder)

🐛 Bug Fix

• species url is case sensitive #865 (@jwodder @satra)

🏠 Internal

• Update bad versions list in .et #866 (@jwodder)

Authors: 2

• John T. Wodder II (@jwodder)
• Satrajit Ghosh (@satra)

0.34.1

🔩 Dependency Updates

• upgrade dandischema requirement from 0.4.1 to 0.5.1 (~=) #868 (@yarikoptic)

Authors: 1

• Yaroslav Halchenko (@yarikoptic)