Repositories list

• transcriptomicClusterMorph

  Public
  Deep learning tools to segment cells and predict phenotype using morphology

  Python

  •2•0•0•0•Updated Feb 5, 2025Feb 5, 2025

• CMDuo-analysis

  Public
  R

  •0•0•0•0•Updated Jan 22, 2025Jan 22, 2025

• pycashier

  Public
  cash in on DNA barcode tags

  bioinformaticspipeline

  Python

  •

  MIT License

  •3•3•4•0•Updated Oct 31, 2024Oct 31, 2024

• clusterCleaver-analysis

  Public
  clusterCleaver analysis and visualization scripts

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 21, 2024Oct 21, 2024

• clonmapper

  Public
  ClonMapper Barcode System Protocol

  TeX

  •1•0•4•0•Updated Sep 6, 2024Sep 6, 2024

• clusterCleaver

  Public
  Separate your clusters with gene distance

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Jul 3, 2024Jul 3, 2024

• clongen

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Aug 28, 2023Aug 28, 2023

• clonmapper-sequencing

  Public
  Python

  •0•0•0•0•Updated Jul 25, 2023Jul 25, 2023

• .github

  Public
  0•0•0•0•Updated May 5, 2023May 5, 2023

• clonrecall

  Public
  python script to make ClonMapper recall oligos/vectors

  Python

  •0•0•0•0•Updated Jan 5, 2023Jan 5, 2023

• brocklab.github.io

  Public
  0•0•0•0•Updated Sep 2, 2022Sep 2, 2022

• cashier

  Public
  Shell

  •2•0•0•0•Updated Jun 3, 2022Jun 3, 2022

• Drug-Response-Dynamics-Model-Calibration

  Public
  A set of MATLAB scripts to calibrate and validate three drug response models to experimental data with a set of doxorubicin response data in breast cancer cell lines

  MATLAB

  •1•0•0•0•Updated May 9, 2022May 9, 2022

• Johnson_Integrated_Modeling

  Public
  MATLAB

  •2•1•0•0•Updated Aug 5, 2020Aug 5, 2020

• Johnson-AlleeGrowthModel

  Public
  MATLAB

  •1•3•0•0•Updated May 21, 2019May 21, 2019

• COLBERT_amplicon_seq

  Public
  Python

  •0•0•0•0•Updated Aug 14, 2018Aug 14, 2018