Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update bcftools/pluginimputeinfo meta.yml #6646

Merged
merged 1 commit into from
Sep 16, 2024
Merged

Update bcftools/pluginimputeinfo meta.yml #6646

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 6 additions & 6 deletions modules/nf-core/bcftools/pluginimputeinfo/meta.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,20 +7,20 @@ keywords:
- imputation
- metrics
- tags
- VCF
- vcf
tools:
- "bcftools":
description: "BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed. Most commands accept VCF, bgzipped VCF and BCF with filetype detected automatically even when streaming from a pipe. Indexed VCF and BCF will work in all situations. Un-indexed VCF and BCF and streams will work in most, but not all situations."
homepage: "http://samtools.github.io/bcftools/bcftools.html"
documentation: "https://samtools.github.io/bcftools/bcftools.html#plugin"
homepage: "https://samtools.github.io/bcftools/howtos/index.html"
documentation: "https://samtools.github.io/bcftools/bcftools.html"
tool_dev_url: "https://github.com/samtools/bcftools"
doi: "10.1093/bioinformatics/btp352"
licence: ["MIT"]
args_id: "$args"
- "bcftools plugin impute-info":
description: "BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed. Most commands accept VCF, bgzipped VCF and BCF with filetype detected automatically even when streaming from a pipe. Indexed VCF and BCF will work in all situations. Un-indexed VCF and BCF and streams will work in most, but not all situations."
homepage: "http://samtools.github.io/bcftools/bcftools.html"
documentation: "https://samtools.github.io/bcftools/howtos/plugins.html"
description: "Bcftools plugins are tools that can be used with bcftools to manipulate variant calls in Variant Call Format (VCF) and BCF. The impute-info plugin adds imputation information metrics to the INFO field based on selected FORMAT tags. Only the IMPUTE2 INFO metric from FORMAT/GP tags is currently available"
homepage: "https://samtools.github.io/bcftools/howtos/plugins.html"
documentation: "https://samtools.github.io/bcftools/bcftools.html#plugin"
tool_dev_url: "https://github.com/samtools/bcftools"
doi: "10.1093/bioinformatics/btp352"
licence: ["MIT"]
Expand Down
Loading