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Merge pull request #215 from maxulysse/refactor
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FIX: custom/dumpsoftwareversions
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maxulysse authored Oct 12, 2023
2 parents 464ae9d + 92e7588 commit 884565c
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Showing 4 changed files with 28 additions and 19 deletions.
12 changes: 11 additions & 1 deletion .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -76,9 +76,19 @@ jobs:
with:
version: "${{ matrix.NXF_VER }}"

- name: Cache nf-test installation
id: cache-software
uses: actions/cache@v3
with:
path: |
/usr/local/bin/nf-test
/home/runner/.nf-test/nf-test.jar
key: ${{ runner.os }}-${{ env.NFTEST_VER }}-nftest

- name: Install nf-test
if: steps.cache-software.outputs.cache-hit != 'true'
run: |
wget -qO- https://code.askimed.com/install/nf-test | bash -s $NFTEST_VER
wget -qO- https://code.askimed.com/install/nf-test | bash
sudo mv nf-test /usr/local/bin/
- name: Run nf-test
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2 changes: 1 addition & 1 deletion modules.json
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
"nf-core": {
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "1526dc37227a1101bdca25339337362e187a6b3b",
"git_sha": "1b372269755a5c4a13c23bc130ebada8cb9d4cd0",
"installed_by": ["modules"]
},
"custom/sratoolsncbisettings": {
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23 changes: 11 additions & 12 deletions modules/nf-core/custom/dumpsoftwareversions/tests/main.nf.test

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