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Log4j 1.2 completely removed, bump to log4j 2.16.0 #233

Merged
merged 2 commits into from
Dec 15, 2021
Merged

Log4j 1.2 completely removed, bump to log4j 2.16.0 #233

merged 2 commits into from
Dec 15, 2021

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brianbolt
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fixes mcneilco/acas#839 by removing log4j completely

mvn dependency:tree -Dverbose

Before Change

[INFO] 
[INFO] --- maven-dependency-plugin:2.8:tree (default-cli) @ acas ---
[INFO] com.labsynch.labseer:acas:war:1.13-BUILD-SNAPSHOT
[INFO] +- com.verhas:license3j:jar:1.0.7:compile
[INFO] |  \- org.bouncycastle:bcpg-jdk15on:jar:1.52:compile
[INFO] |     \- org.bouncycastle:bcprov-jdk15on:jar:1.52:compile
[INFO] +- com.mangofactory:swagger-springmvc:jar:0.9.4:compile
[INFO] |  +- com.wordnik:swagger-annotations:jar:1.3.11:compile
[INFO] |  +- com.google.guava:guava:jar:15.0:compile
[INFO] |  +- com.fasterxml:classmate:jar:1.1.0:compile
[INFO] |  +- (org.slf4j:slf4j-api:jar:1.7.7:compile - omitted for conflict with 1.7.5)
[INFO] |  +- (joda-time:joda-time:jar:2.5:compile - omitted for conflict with 1.6)
[INFO] |  +- org.springframework:spring-web:jar:3.2.9.RELEASE:compile
[INFO] |  |  +- (org.springframework:spring-aop:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-beans:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-context:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  \- (org.springframework:spring-core:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-webmvc:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- com.mangofactory:swagger-models:jar:0.9.4:compile
[INFO] |     +- (com.wordnik:swagger-annotations:jar:1.3.11:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:15.0:compile - omitted for duplicate)
[INFO] |     +- (com.fasterxml:classmate:jar:1.1.0:compile - omitted for duplicate)
[INFO] |     +- (org.slf4j:slf4j-api:jar:1.7.7:compile - omitted for duplicate)
[INFO] |     +- (joda-time:joda-time:jar:2.5:compile - omitted for duplicate)
[INFO] |     +- (org.springframework:spring-web:jar:3.2.9.RELEASE:compile - omitted for duplicate)
[INFO] |     \- (org.springframework:spring-webmvc:jar:3.2.9.RELEASE:compile - omitted for duplicate)
[INFO] +- com.thetransactioncompany:cors-filter:jar:1.3.2:compile
[INFO] |  +- com.thetransactioncompany:java-property-utils:jar:1.6:compile
[INFO] |  |  \- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] +- net.sf.supercsv:super-csv:jar:2.0.1:compile
[INFO] +- junit:junit:jar:4.11:test (scope not updated to compile)
[INFO] |  \- org.hamcrest:hamcrest-core:jar:1.3:test
[INFO] +- org.apache.logging.log4j:log4j-api:jar:2.15.0:compile
[INFO] +- org.apache.logging.log4j:log4j-core:jar:2.15.0:compile
[INFO] |  \- (org.apache.logging.log4j:log4j-api:jar:2.15.0:compile - omitted for duplicate)
[INFO] +- org.slf4j:slf4j-api:jar:1.7.5:compile
[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.5:compile
[INFO] |  \- (org.slf4j:slf4j-api:jar:1.7.5:compile - omitted for duplicate)
[INFO] +- org.slf4j:slf4j-log4j12:jar:1.7.5:compile
[INFO] |  +- (org.slf4j:slf4j-api:jar:1.7.5:compile - omitted for duplicate)
[INFO] |  \- log4j:log4j:jar:1.2.17:compile
[INFO] +- org.aspectj:aspectjrt:jar:1.9.2:compile
[INFO] +- org.aspectj:aspectjweaver:jar:1.9.2:compile
[INFO] +- javax.servlet:servlet-api:jar:2.5:provided (scope not updated to compile)
[INFO] +- net.sf.flexjson:flexjson:jar:3.1:compile
[INFO] +- org.codehaus.jackson:jackson-core-asl:jar:1.9.13:compile
[INFO] +- org.codehaus.jackson:jackson-mapper-asl:jar:1.9.13:compile
[INFO] |  \- (org.codehaus.jackson:jackson-core-asl:jar:1.9.13:compile - omitted for duplicate)
[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.1.0:compile
[INFO] |  +- com.fasterxml.jackson.core:jackson-annotations:jar:2.1.0:compile
[INFO] |  \- com.fasterxml.jackson.core:jackson-core:jar:2.1.0:compile
[INFO] +- org.apache.commons:commons-lang3:jar:3.1:compile
[INFO] +- commons-io:commons-io:jar:2.4:compile
[INFO] +- org.flywaydb:flyway-core:jar:4.2.0:compile
[INFO] +- org.springframework.roo:org.springframework.roo.annotations:jar:1.3.2.RELEASE:provided
[INFO] |  +- (org.apache.commons:commons-lang3:jar:3.1:provided - omitted for duplicate)
[INFO] |  +- (commons-io:commons-io:jar:2.4:provided - omitted for duplicate)
[INFO] |  \- (commons-codec:commons-codec:jar:1.8:provided - omitted for conflict with 1.5)
[INFO] +- org.springframework:spring-core:jar:3.2.11.RELEASE:compile
[INFO] +- org.springframework:spring-test:jar:3.2.11.RELEASE:test
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:test - omitted for duplicate)
[INFO] +- org.springframework:spring-context:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- org.springframework:spring-expression:jar:3.2.11.RELEASE:compile
[INFO] |     \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-aop:jar:3.2.11.RELEASE:compile
[INFO] |  +- aopalliance:aopalliance:jar:1.0:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-aspects:jar:3.2.11.RELEASE:compile
[INFO] |  \- (org.aspectj:aspectjweaver:jar:1.7.4:compile - omitted for conflict with 1.9.2)
[INFO] +- org.hibernate:hibernate-core:jar:4.3.11.Final:compile
[INFO] |  +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile
[INFO] |  +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile
[INFO] |  +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile
[INFO] |  +- (dom4j:dom4j:jar:1.6.1:compile - omitted for conflict with 1.3)
[INFO] |  +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile
[INFO] |  |  +- (org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile - omitted for duplicate)
[INFO] |  |  \- (org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  +- org.javassist:javassist:jar:3.18.1-GA:compile
[INFO] |  +- antlr:antlr:jar:2.7.7:compile
[INFO] |  \- org.jboss:jandex:jar:1.1.0.Final:compile
[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.11.Final:compile
[INFO] |  +- (org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile - omitted for duplicate)
[INFO] |  +- (org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate:hibernate-core:jar:4.3.11.Final:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  +- (org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  \- (org.javassist:javassist:jar:3.18.1-GA:compile - omitted for duplicate)
[INFO] +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile
[INFO] +- commons-collections:commons-collections:jar:3.2.2:compile
[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile
[INFO] |  +- (javax.validation:validation-api:jar:1.0.0.GA:compile - omitted for duplicate)
[INFO] |  \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.3.GA)
[INFO] +- javax.validation:validation-api:jar:1.0.0.GA:compile
[INFO] +- cglib:cglib-nodep:jar:2.2.2:compile
[INFO] +- javax.transaction:jta:jar:1.1:compile
[INFO] +- org.springframework:spring-jdbc:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- org.springframework:spring-tx:jar:3.2.11.RELEASE:compile
[INFO] |     +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |     \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-orm:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-jdbc:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-tx:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-beans:jar:3.2.11.RELEASE:compile
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- commons-pool:commons-pool:jar:1.5.6:compile
[INFO] +- commons-dbcp:commons-dbcp:jar:1.4:compile
[INFO] |  \- (commons-pool:commons-pool:jar:1.5.4:compile - omitted for conflict with 1.5.6)
[INFO] +- org.springframework:spring-webmvc:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.11.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework.webflow:spring-js-resources:jar:2.2.1.RELEASE:compile
[INFO] +- commons-digester:commons-digester:jar:2.1:compile
[INFO] |  \- commons-beanutils:commons-beanutils:jar:1.8.3:compile
[INFO] +- commons-fileupload:commons-fileupload:jar:1.2.2:compile
[INFO] +- javax.servlet.jsp.jstl:jstl-api:jar:1.2:compile
[INFO] |  +- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet.jsp:jsp-api:jar:2.1:compile - omitted for duplicate)
[INFO] +- org.glassfish.web:jstl-impl:jar:1.2:compile
[INFO] |  +- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  +- (javax.servlet.jsp:jsp-api:jar:2.1:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet.jsp.jstl:jstl-api:jar:1.2:compile - omitted for duplicate)
[INFO] +- javax.el:el-api:jar:2.2:provided
[INFO] +- joda-time:joda-time:jar:1.6:compile
[INFO] +- javax.servlet.jsp:jsp-api:jar:2.1:provided (scope not updated to compile)
[INFO] +- commons-codec:commons-codec:jar:1.5:compile
[INFO] +- org.apache.tiles:tiles-jsp:jar:2.2.2:compile
[INFO] |  +- org.apache.tiles:tiles-servlet:jar:2.2.2:compile
[INFO] |  |  \- org.apache.tiles:tiles-core:jar:2.2.2:compile
[INFO] |  |     +- (org.apache.tiles:tiles-api:jar:2.2.2:compile - omitted for duplicate)
[INFO] |  |     +- (commons-digester:commons-digester:jar:2.0:compile - omitted for conflict with 2.1)
[INFO] |  |     \- (org.slf4j:jcl-over-slf4j:jar:1.5.8:compile - omitted for conflict with 1.7.5)
[INFO] |  \- org.apache.tiles:tiles-template:jar:2.2.2:compile
[INFO] |     \- org.apache.tiles:tiles-api:jar:2.2.2:compile
[INFO] +- com.mysema.querydsl:querydsl-spatial:jar:3.4.3:compile
[INFO] |  \- com.mysema.querydsl:querydsl-core:jar:3.4.3:compile
[INFO] |     +- (com.google.guava:guava:jar:14.0:compile - omitted for conflict with 15.0)
[INFO] |     +- com.google.code.findbugs:jsr305:jar:1.3.9:compile
[INFO] |     +- com.mysema.commons:mysema-commons-lang:jar:0.2.4:compile
[INFO] |     \- com.infradna.tool:bridge-method-annotation:jar:1.13:compile
[INFO] +- com.mysema.querydsl:querydsl-apt:jar:3.4.3:provided
[INFO] |  \- com.mysema.querydsl:querydsl-codegen:jar:3.4.3:provided
[INFO] |     +- (com.mysema.querydsl:querydsl-core:jar:3.4.3:provided - omitted for duplicate)
[INFO] |     +- com.mysema.codegen:codegen:jar:0.6.3:provided
[INFO] |     |  +- (com.google.guava:guava:jar:11.0.2:provided - omitted for conflict with 15.0)
[INFO] |     |  \- org.eclipse.jdt.core.compiler:ecj:jar:4.3.1:provided
[INFO] |     \- javax.inject:javax.inject:jar:1:provided
[INFO] +- com.mysema.querydsl:querydsl-jpa:jar:3.4.3:compile
[INFO] |  +- (com.mysema.querydsl:querydsl-core:jar:3.4.3:compile - omitted for duplicate)
[INFO] |  \- (org.slf4j:slf4j-api:jar:1.6.1:compile - omitted for conflict with 1.7.5)
[INFO] +- net.tanesha.recaptcha4j:recaptcha4j:jar:0.0.7:compile
[INFO] +- org.springframework.security:spring-security-ldap:jar:3.2.5.RELEASE:compile
[INFO] |  +- (org.springframework.ldap:spring-ldap-core:jar:1.3.2.RELEASE:compile - omitted for conflict with 1.3.0.RELEASE)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-tx:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.ldap:spring-ldap-core:jar:1.3.0.RELEASE:compile
[INFO] |  +- commons-logging:commons-logging:jar:1.0.4:compile
[INFO] |  +- commons-lang:commons-lang:jar:2.1:compile
[INFO] |  +- (org.springframework:spring-core:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-tx:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.ldap:spring-ldap-core-tiger:jar:1.3.0.RELEASE:compile
[INFO] |  +- (org.springframework.ldap:spring-ldap-core:jar:1.3.0.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-tx:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (commons-logging:commons-logging:jar:1.0.4:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-beans:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-config:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-web:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework.security:spring-security-taglibs:jar:3.2.5.RELEASE:compile
[INFO] |  +- org.springframework.security:spring-security-acl:jar:3.2.5.RELEASE:compile
[INFO] |  |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-jdbc:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  \- (org.springframework:spring-tx:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-web:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework:spring-context-support:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- javax.mail:mail:jar:1.4.1:compile
[INFO] |  \- (javax.activation:activation:jar:1.1:compile - omitted for conflict with 1.1.1)
[INFO] +- javax.activation:activation:jar:1.1.1:compile
[INFO] +- org.postgresql:postgresql:jar:9.4.1212.jre7:compile
[INFO] +- net.sourceforge.jtds:jtds:jar:1.3.1:compile
[INFO] +- dom4j:dom4j:jar:1.3:compile
[INFO] +- com.beust:jcommander:jar:1.7:compile
[INFO] +- net.sf.trove4j:trove4j:jar:3.0.3:compile
[INFO] +- com.github.javadev:underscore:jar:1.19:compile
[INFO] +- org.openscience.cdk:cdk-formula:jar:1.5.13:compile
[INFO] |  +- javax.vecmath:vecmath:jar:1.5.2:compile
[INFO] |  +- org.openscience.cdk:cdk-core:jar:1.5.13:compile
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  \- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- org.openscience.cdk:cdk-standard:jar:1.5.13:compile
[INFO] |     +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |     \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-io:jar:1.5.13:compile
[INFO] |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  +- xpp3:xpp3:jar:1.1.4c:compile
[INFO] |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-ioformats:jar:1.5.13:compile
[INFO] |  |  \- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-atomtype:jar:1.5.13:compile
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- org.openscience.cdk:cdk-isomorphism:jar:1.5.13:compile
[INFO] |     +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |     \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile
[INFO] |  \- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-depict:jar:1.5.13:compile
[INFO] |  +- org.openscience.cdk:cdk-renderextra:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- org.openscience.cdk:cdk-render:jar:1.5.13:compile
[INFO] |  |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  |  \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-renderawt:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-render:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-render:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-smiles:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- uk.ac.ebi.beam:beam-core:jar:0.9.1:compile
[INFO] |  |  +- uk.ac.ebi.beam:beam-func:jar:0.9.1:compile
[INFO] |  |  |  \- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-ioformats:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-io:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile
[INFO] |  |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |     +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |     \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-smarts:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-func:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-isomorphism:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-sdg:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-func:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-io:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-smiles:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-silent:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.freehep:freehep-graphicsio-svg:jar:2.4:compile
[INFO] |  |  +- org.freehep:freehep-graphics2d:jar:2.4:compile
[INFO] |  |  |  +- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  |  +- org.freehep:freehep-graphicsio:jar:2.4:compile
[INFO] |  |  |  +- (org.freehep:freehep-graphics2d:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  +- org.freehep:freehep-io:jar:2.2.2:compile
[INFO] |  |  |  |  \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  |  |  \- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  +- org.freehep:freehep-graphicsio-tests:jar:2.4:compile
[INFO] |  |  |  +- (org.freehep:freehep-graphics2d:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  +- (org.freehep:freehep-graphicsio:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  +- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  |  \- org.freehep:freehep-graphicsbase:jar:2.4:compile
[INFO] |  |     +- (org.freehep:freehep-io:jar:2.2.2:compile - omitted for duplicate)
[INFO] |  |     \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  \- org.freehep:freehep-graphicsio-pdf:jar:2.4:compile
[INFO] |     +- (org.freehep:freehep-graphics2d:jar:2.4:compile - omitted for duplicate)
[INFO] |     +- (org.freehep:freehep-graphicsio:jar:2.4:compile - omitted for duplicate)
[INFO] |     +- (org.freehep:freehep-graphicsio-tests:jar:2.4:compile - omitted for duplicate)
[INFO] |     \- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-inchi:jar:1.5.13:compile
[INFO] |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  +- net.sf.jni-inchi:jni-inchi:jar:0.8:compile
[INFO] |  |  \- net.sf.jnati:jnati-deploy:jar:0.4:compile
[INFO] |  |     +- net.sf.jnati:jnati-core:jar:0.4:compile
[INFO] |  |     |  \- (log4j:log4j:jar:1.2.14:compile - omitted for conflict with 1.2.17)
[INFO] |  |     \- (log4j:log4j:jar:1.2.14:compile - omitted for conflict with 1.2.17)
[INFO] |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] \- com.chemaxon:jchem:jar:16.4.25.0:compile
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 01:02 min
[INFO] Finished at: 2021-12-14T11:35:58-08:00
[INFO] Final Memory: 20M/256M
[INFO] ------------------------------------------------------------------------

[INFO] Scanning for projects...
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building acas 1.13-BUILD-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-dependency-plugin:2.8:tree (default-cli) @ acas ---
[INFO] com.labsynch.labseer:acas:war:1.13-BUILD-SNAPSHOT
[INFO] +- com.verhas:license3j:jar:1.0.7:compile
[INFO] |  \- org.bouncycastle:bcpg-jdk15on:jar:1.52:compile
[INFO] |     \- org.bouncycastle:bcprov-jdk15on:jar:1.52:compile
[INFO] +- com.mangofactory:swagger-springmvc:jar:0.9.4:compile
[INFO] |  +- com.wordnik:swagger-annotations:jar:1.3.11:compile
[INFO] |  +- com.google.guava:guava:jar:15.0:compile
[INFO] |  +- com.fasterxml:classmate:jar:1.1.0:compile
[INFO] |  +- (org.slf4j:slf4j-api:jar:1.7.7:compile - omitted for conflict with 1.7.5)
[INFO] |  +- (joda-time:joda-time:jar:2.5:compile - omitted for conflict with 1.6)
[INFO] |  +- org.springframework:spring-web:jar:3.2.9.RELEASE:compile
[INFO] |  |  +- (org.springframework:spring-aop:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-beans:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-context:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  \- (org.springframework:spring-core:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-webmvc:jar:3.2.9.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- com.mangofactory:swagger-models:jar:0.9.4:compile
[INFO] |     +- (com.wordnik:swagger-annotations:jar:1.3.11:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:15.0:compile - omitted for duplicate)
[INFO] |     +- (com.fasterxml:classmate:jar:1.1.0:compile - omitted for duplicate)
[INFO] |     +- (org.slf4j:slf4j-api:jar:1.7.7:compile - omitted for duplicate)
[INFO] |     +- (joda-time:joda-time:jar:2.5:compile - omitted for duplicate)
[INFO] |     +- (org.springframework:spring-web:jar:3.2.9.RELEASE:compile - omitted for duplicate)
[INFO] |     \- (org.springframework:spring-webmvc:jar:3.2.9.RELEASE:compile - omitted for duplicate)
[INFO] +- com.thetransactioncompany:cors-filter:jar:1.3.2:compile
[INFO] |  +- com.thetransactioncompany:java-property-utils:jar:1.6:compile
[INFO] |  |  \- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] +- net.sf.supercsv:super-csv:jar:2.0.1:compile
[INFO] +- junit:junit:jar:4.11:test (scope not updated to compile)
[INFO] |  \- org.hamcrest:hamcrest-core:jar:1.3:test
[INFO] +- org.apache.logging.log4j:log4j-api:jar:2.16.0:compile
[INFO] +- org.apache.logging.log4j:log4j-core:jar:2.16.0:compile
[INFO] |  \- (org.apache.logging.log4j:log4j-api:jar:2.16.0:compile - omitted for duplicate)
[INFO] +- org.slf4j:slf4j-api:jar:1.7.5:compile
[INFO] +- org.slf4j:jcl-over-slf4j:jar:1.7.5:compile
[INFO] |  \- (org.slf4j:slf4j-api:jar:1.7.5:compile - omitted for duplicate)
[INFO] +- org.apache.logging.log4j:log4j-slf4j-impl:jar:2.16.0:compile
[INFO] |  +- (org.slf4j:slf4j-api:jar:1.7.25:compile - omitted for conflict with 1.7.5)
[INFO] |  +- (org.apache.logging.log4j:log4j-api:jar:2.16.0:compile - omitted for duplicate)
[INFO] |  \- (org.apache.logging.log4j:log4j-core:jar:2.16.0:runtime - omitted for duplicate)
[INFO] +- org.aspectj:aspectjrt:jar:1.9.2:compile
[INFO] +- org.aspectj:aspectjweaver:jar:1.9.2:compile
[INFO] +- javax.servlet:servlet-api:jar:2.5:provided (scope not updated to compile)
[INFO] +- net.sf.flexjson:flexjson:jar:3.1:compile
[INFO] +- org.codehaus.jackson:jackson-core-asl:jar:1.9.13:compile
[INFO] +- org.codehaus.jackson:jackson-mapper-asl:jar:1.9.13:compile
[INFO] |  \- (org.codehaus.jackson:jackson-core-asl:jar:1.9.13:compile - omitted for duplicate)
[INFO] +- com.fasterxml.jackson.core:jackson-databind:jar:2.1.0:compile
[INFO] |  +- com.fasterxml.jackson.core:jackson-annotations:jar:2.1.0:compile
[INFO] |  \- com.fasterxml.jackson.core:jackson-core:jar:2.1.0:compile
[INFO] +- org.apache.commons:commons-lang3:jar:3.1:compile
[INFO] +- commons-io:commons-io:jar:2.4:compile
[INFO] +- org.flywaydb:flyway-core:jar:4.2.0:compile
[INFO] +- org.springframework.roo:org.springframework.roo.annotations:jar:1.3.2.RELEASE:provided
[INFO] |  +- (org.apache.commons:commons-lang3:jar:3.1:provided - omitted for duplicate)
[INFO] |  +- (commons-io:commons-io:jar:2.4:provided - omitted for duplicate)
[INFO] |  \- (commons-codec:commons-codec:jar:1.8:provided - omitted for conflict with 1.5)
[INFO] +- org.springframework:spring-core:jar:3.2.11.RELEASE:compile
[INFO] +- org.springframework:spring-test:jar:3.2.11.RELEASE:test
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:test - omitted for duplicate)
[INFO] +- org.springframework:spring-context:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- org.springframework:spring-expression:jar:3.2.11.RELEASE:compile
[INFO] |     \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-aop:jar:3.2.11.RELEASE:compile
[INFO] |  +- aopalliance:aopalliance:jar:1.0:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-aspects:jar:3.2.11.RELEASE:compile
[INFO] |  \- (org.aspectj:aspectjweaver:jar:1.7.4:compile - omitted for conflict with 1.9.2)
[INFO] +- org.hibernate:hibernate-core:jar:4.3.11.Final:compile
[INFO] |  +- org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile
[INFO] |  +- org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile
[INFO] |  +- org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile
[INFO] |  +- (dom4j:dom4j:jar:1.6.1:compile - omitted for conflict with 1.3)
[INFO] |  +- org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile
[INFO] |  |  +- (org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile - omitted for duplicate)
[INFO] |  |  \- (org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  +- org.javassist:javassist:jar:3.18.1-GA:compile
[INFO] |  +- antlr:antlr:jar:2.7.7:compile
[INFO] |  \- org.jboss:jandex:jar:1.1.0.Final:compile
[INFO] +- org.hibernate:hibernate-entitymanager:jar:4.3.11.Final:compile
[INFO] |  +- (org.jboss.logging:jboss-logging:jar:3.1.3.GA:compile - omitted for duplicate)
[INFO] |  +- (org.jboss.logging:jboss-logging-annotations:jar:1.2.0.Beta1:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate:hibernate-core:jar:4.3.11.Final:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.common:hibernate-commons-annotations:jar:4.0.5.Final:compile - omitted for duplicate)
[INFO] |  +- (org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  +- (org.jboss.spec.javax.transaction:jboss-transaction-api_1.2_spec:jar:1.0.0.Final:compile - omitted for duplicate)
[INFO] |  \- (org.javassist:javassist:jar:3.18.1-GA:compile - omitted for duplicate)
[INFO] +- org.hibernate.javax.persistence:hibernate-jpa-2.1-api:jar:1.0.0.Final:compile
[INFO] +- commons-collections:commons-collections:jar:3.2.2:compile
[INFO] +- org.hibernate:hibernate-validator:jar:4.3.2.Final:compile
[INFO] |  +- (javax.validation:validation-api:jar:1.0.0.GA:compile - omitted for duplicate)
[INFO] |  \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.3.GA)
[INFO] +- javax.validation:validation-api:jar:1.0.0.GA:compile
[INFO] +- cglib:cglib-nodep:jar:2.2.2:compile
[INFO] +- javax.transaction:jta:jar:1.1:compile
[INFO] +- org.springframework:spring-jdbc:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- org.springframework:spring-tx:jar:3.2.11.RELEASE:compile
[INFO] |     +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |     \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-orm:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-jdbc:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-tx:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- org.springframework:spring-beans:jar:3.2.11.RELEASE:compile
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- commons-pool:commons-pool:jar:1.5.6:compile
[INFO] +- commons-dbcp:commons-dbcp:jar:1.4:compile
[INFO] |  \- (commons-pool:commons-pool:jar:1.5.4:compile - omitted for conflict with 1.5.6)
[INFO] +- org.springframework:spring-webmvc:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.11.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework.webflow:spring-js-resources:jar:2.2.1.RELEASE:compile
[INFO] +- commons-digester:commons-digester:jar:2.1:compile
[INFO] |  \- commons-beanutils:commons-beanutils:jar:1.8.3:compile
[INFO] +- commons-fileupload:commons-fileupload:jar:1.2.2:compile
[INFO] +- javax.servlet.jsp.jstl:jstl-api:jar:1.2:compile
[INFO] |  +- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet.jsp:jsp-api:jar:2.1:compile - omitted for duplicate)
[INFO] +- org.glassfish.web:jstl-impl:jar:1.2:compile
[INFO] |  +- (javax.servlet:servlet-api:jar:2.5:compile - omitted for duplicate)
[INFO] |  +- (javax.servlet.jsp:jsp-api:jar:2.1:compile - omitted for duplicate)
[INFO] |  \- (javax.servlet.jsp.jstl:jstl-api:jar:1.2:compile - omitted for duplicate)
[INFO] +- javax.el:el-api:jar:2.2:provided
[INFO] +- joda-time:joda-time:jar:1.6:compile
[INFO] +- javax.servlet.jsp:jsp-api:jar:2.1:provided (scope not updated to compile)
[INFO] +- commons-codec:commons-codec:jar:1.5:compile
[INFO] +- org.apache.tiles:tiles-jsp:jar:2.2.2:compile
[INFO] |  +- org.apache.tiles:tiles-servlet:jar:2.2.2:compile
[INFO] |  |  \- org.apache.tiles:tiles-core:jar:2.2.2:compile
[INFO] |  |     +- (org.apache.tiles:tiles-api:jar:2.2.2:compile - omitted for duplicate)
[INFO] |  |     +- (commons-digester:commons-digester:jar:2.0:compile - omitted for conflict with 2.1)
[INFO] |  |     \- (org.slf4j:jcl-over-slf4j:jar:1.5.8:compile - omitted for conflict with 1.7.5)
[INFO] |  \- org.apache.tiles:tiles-template:jar:2.2.2:compile
[INFO] |     \- org.apache.tiles:tiles-api:jar:2.2.2:compile
[INFO] +- com.mysema.querydsl:querydsl-spatial:jar:3.4.3:compile
[INFO] |  \- com.mysema.querydsl:querydsl-core:jar:3.4.3:compile
[INFO] |     +- (com.google.guava:guava:jar:14.0:compile - omitted for conflict with 15.0)
[INFO] |     +- com.google.code.findbugs:jsr305:jar:1.3.9:compile
[INFO] |     +- com.mysema.commons:mysema-commons-lang:jar:0.2.4:compile
[INFO] |     \- com.infradna.tool:bridge-method-annotation:jar:1.13:compile
[INFO] +- com.mysema.querydsl:querydsl-apt:jar:3.4.3:provided
[INFO] |  \- com.mysema.querydsl:querydsl-codegen:jar:3.4.3:provided
[INFO] |     +- (com.mysema.querydsl:querydsl-core:jar:3.4.3:provided - omitted for duplicate)
[INFO] |     +- com.mysema.codegen:codegen:jar:0.6.3:provided
[INFO] |     |  +- (com.google.guava:guava:jar:11.0.2:provided - omitted for conflict with 15.0)
[INFO] |     |  \- org.eclipse.jdt.core.compiler:ecj:jar:4.3.1:provided
[INFO] |     \- javax.inject:javax.inject:jar:1:provided
[INFO] +- com.mysema.querydsl:querydsl-jpa:jar:3.4.3:compile
[INFO] |  +- (com.mysema.querydsl:querydsl-core:jar:3.4.3:compile - omitted for duplicate)
[INFO] |  \- (org.slf4j:slf4j-api:jar:1.6.1:compile - omitted for conflict with 1.7.5)
[INFO] +- net.tanesha.recaptcha4j:recaptcha4j:jar:0.0.7:compile
[INFO] +- org.springframework.security:spring-security-ldap:jar:3.2.5.RELEASE:compile
[INFO] |  +- (org.springframework.ldap:spring-ldap-core:jar:1.3.2.RELEASE:compile - omitted for conflict with 1.3.0.RELEASE)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-tx:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.ldap:spring-ldap-core:jar:1.3.0.RELEASE:compile
[INFO] |  +- commons-logging:commons-logging:jar:1.0.4:compile
[INFO] |  +- commons-lang:commons-lang:jar:2.1:compile
[INFO] |  +- (org.springframework:spring-core:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-tx:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.ldap:spring-ldap-core-tiger:jar:1.3.0.RELEASE:compile
[INFO] |  +- (org.springframework.ldap:spring-ldap-core:jar:1.3.0.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-tx:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (commons-logging:commons-logging:jar:1.0.4:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-core:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-beans:jar:2.5.6:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-config:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] +- org.springframework.security:spring-security-web:jar:3.2.5.RELEASE:compile
[INFO] |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework.security:spring-security-taglibs:jar:3.2.5.RELEASE:compile
[INFO] |  +- org.springframework.security:spring-security-acl:jar:3.2.5.RELEASE:compile
[INFO] |  |  +- (aopalliance:aopalliance:jar:1.0:compile - omitted for duplicate)
[INFO] |  |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  +- (org.springframework:spring-jdbc:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  |  \- (org.springframework:spring-tx:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework.security:spring-security-core:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework.security:spring-security-web:jar:3.2.5.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-aop:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-core:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  +- (org.springframework:spring-expression:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.11.RELEASE)
[INFO] |  \- (org.springframework:spring-web:jar:3.2.8.RELEASE:compile - omitted for conflict with 3.2.9.RELEASE)
[INFO] +- org.springframework:spring-context-support:jar:3.2.11.RELEASE:compile
[INFO] |  +- (org.springframework:spring-beans:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  +- (org.springframework:spring-context:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] |  \- (org.springframework:spring-core:jar:3.2.11.RELEASE:compile - omitted for duplicate)
[INFO] +- javax.mail:mail:jar:1.4.1:compile
[INFO] |  \- (javax.activation:activation:jar:1.1:compile - omitted for conflict with 1.1.1)
[INFO] +- javax.activation:activation:jar:1.1.1:compile
[INFO] +- org.postgresql:postgresql:jar:9.4.1212.jre7:compile
[INFO] +- net.sourceforge.jtds:jtds:jar:1.3.1:compile
[INFO] +- dom4j:dom4j:jar:1.3:compile
[INFO] +- com.beust:jcommander:jar:1.7:compile
[INFO] +- net.sf.trove4j:trove4j:jar:3.0.3:compile
[INFO] +- com.github.javadev:underscore:jar:1.19:compile
[INFO] +- org.openscience.cdk:cdk-formula:jar:1.5.13:compile
[INFO] |  +- javax.vecmath:vecmath:jar:1.5.2:compile
[INFO] |  +- org.openscience.cdk:cdk-core:jar:1.5.13:compile
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  \- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- org.openscience.cdk:cdk-standard:jar:1.5.13:compile
[INFO] |     +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |     \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-io:jar:1.5.13:compile
[INFO] |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  +- xpp3:xpp3:jar:1.1.4c:compile
[INFO] |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-ioformats:jar:1.5.13:compile
[INFO] |  |  \- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-atomtype:jar:1.5.13:compile
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- org.openscience.cdk:cdk-isomorphism:jar:1.5.13:compile
[INFO] |     +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |     +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |     \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile
[INFO] |  \- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-depict:jar:1.5.13:compile
[INFO] |  +- org.openscience.cdk:cdk-renderextra:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- org.openscience.cdk:cdk-render:jar:1.5.13:compile
[INFO] |  |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  |  \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-renderawt:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-render:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-renderbasic:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-render:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-smiles:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- uk.ac.ebi.beam:beam-core:jar:0.9.1:compile
[INFO] |  |  +- uk.ac.ebi.beam:beam-func:jar:0.9.1:compile
[INFO] |  |  |  \- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-ioformats:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-io:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile
[INFO] |  |     +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |     +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |     \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-smarts:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-func:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-isomorphism:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-sdg:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-core:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (uk.ac.ebi.beam:beam-func:jar:0.9.1:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-io:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  +- (org.openscience.cdk:cdk-valencycheck:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-smiles:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.openscience.cdk:cdk-silent:jar:1.5.13:compile
[INFO] |  |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  |  +- (com.google.guava:guava:jar:17.0:compile - omitted for conflict with 15.0)
[INFO] |  |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  |  \- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- org.freehep:freehep-graphicsio-svg:jar:2.4:compile
[INFO] |  |  +- org.freehep:freehep-graphics2d:jar:2.4:compile
[INFO] |  |  |  +- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] |  |  |  \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  |  +- org.freehep:freehep-graphicsio:jar:2.4:compile
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[INFO] |  |  |  +- org.freehep:freehep-io:jar:2.2.2:compile
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[INFO] |  |  +- org.freehep:freehep-graphicsio-tests:jar:2.4:compile
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[INFO] |  |  |  \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  |  \- org.freehep:freehep-graphicsbase:jar:2.4:compile
[INFO] |  |     +- (org.freehep:freehep-io:jar:2.2.2:compile - omitted for duplicate)
[INFO] |  |     \- (junit:junit:jar:4.10:compile - omitted for conflict with 4.11)
[INFO] |  \- org.freehep:freehep-graphicsio-pdf:jar:2.4:compile
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[INFO] |     \- (org.freehep:freehep-graphicsbase:jar:2.4:compile - omitted for duplicate)
[INFO] +- org.openscience.cdk:cdk-inchi:jar:1.5.13:compile
[INFO] |  +- (javax.vecmath:vecmath:jar:1.5.2:compile - omitted for duplicate)
[INFO] |  +- net.sf.jni-inchi:jni-inchi:jar:0.8:compile
[INFO] |  |  \- net.sf.jnati:jnati-deploy:jar:0.4:compile
[INFO] |  |     \- net.sf.jnati:jnati-core:jar:0.4:compile
[INFO] |  +- (org.openscience.cdk:cdk-core:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  +- (org.openscience.cdk:cdk-interfaces:jar:1.5.13:compile - omitted for duplicate)
[INFO] |  \- (org.openscience.cdk:cdk-standard:jar:1.5.13:compile - omitted for duplicate)
[INFO] \- com.chemaxon:jchem:jar:16.4.25.0:compile
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 3.059 s
[INFO] Finished at: 2021-12-14T11:38:24-08:00
[INFO] Final Memory: 16M/256M
[INFO] ------------------------------------------------------------------------

bffrost
bffrost approved these changes Dec 14, 2021
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LGTM. Once you've made sure this compiles and is able to log, please proceed with merging!

@brianbolt
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I'm actually not seeing spring logging to the console in docker as I expect so there are issues here. Looking into it now.

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I converted log4j.properties to log4j2.xml using https://logging.apache.org/log4j/log4j-2.4/manual/migration.html

I verified I could see logging from all of our classes (com.labsynch.labseer, org.springframework...etc.)

@brianbolt brianbolt requested a review from bffrost December 15, 2021 00:09
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Additionally, to note I removed the RollingFile log appender. I'm unsure if its actually using that currently because I don't see it being provided a file, but in either case I don't think we want it as we are almost always viewing logs via STDOUT docker logging.

bffrost
bffrost approved these changes Dec 15, 2021
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LGTM, I see the new properties correspond to the old, with the exception of those around that RollingFile appender that I guess was long ago attached to catalina.out.

Agreed that the docker logs are what's of value now.

@brianbolt brianbolt merged commit 470e29f into release/1.13.6 Dec 15, 2021
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