[query] split yet another test (#13169)

hail-is · Jun 13, 2023 · a4ca239 · a4ca239
1 parent 3e1a740
commit a4ca239
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Showing 37 changed files with 15 additions and 10 deletions.
diff --git a/hail/python/test/hail/table/test_table.py b/hail/python/test/hail/table/test_table.py
@@ -964,13 +964,9 @@ def test_read_back_same_as_exported(self):
         t_read_back = hl.import_table(tmp_file, types=dict(t.row.dtype)).key_by('idx')
         self.assertTrue(t.select_globals()._same(t_read_back, tolerance=1e-4, absolute=True))
 
-    def test_indexed_read(self):
-        t = hl.utils.range_table(2000, 10)
-        f = new_temp_file(extension='ht')
-        t.write(f)
-        t1 = hl.read_table(f, _create_row_uids=True)
-
-        t2 = hl.read_table(f, _intervals=[
+    def test_indexed_read_1(self):
+        t1 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _create_row_uids=True)
+        t2 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _intervals=[
             hl.Interval(start=150, end=250, includes_start=True, includes_end=False),
             hl.Interval(start=250, end=500, includes_start=True, includes_end=False),
         ], _create_row_uids=True)
@@ -979,14 +975,18 @@ def test_indexed_read(self):
         self.assertEqual(t2._force_count(), 350)
         self.assertTrue(t1.filter((t1.idx >= 150) & (t1.idx < 500))._same(t2))
 
-        t2 = hl.read_table(f, _intervals=[
+    def test_indexed_read_2(self):
+        t1 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _create_row_uids=True)
+        t2 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _intervals=[
             hl.Interval(start=150, end=250, includes_start=True, includes_end=False),
             hl.Interval(start=250, end=500, includes_start=True, includes_end=False),
         ], _filter_intervals=True, _create_row_uids=True)
         self.assertEqual(t2.n_partitions(), 3)
         self.assertTrue(t1.filter((t1.idx >= 150) & (t1.idx < 500))._same(t2))
 
-        t2 = hl.read_table(f, _intervals=[
+    def test_indexed_read_3(self):
+        t1 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _create_row_uids=True)
+        t2 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _intervals=[
             hl.Interval(start=150, end=250, includes_start=False, includes_end=True),
             hl.Interval(start=250, end=500, includes_start=False, includes_end=True),
         ], _create_row_uids=True)
@@ -995,7 +995,9 @@ def test_indexed_read(self):
         self.assertEqual(t2._force_count(), 350)
         self.assertTrue(t1.filter((t1.idx > 150) & (t1.idx <= 500))._same(t2))
 
-        t2 = hl.read_table(f, _intervals=[
+    def test_indexed_read_4(self):
+        t1 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _create_row_uids=True)
+        t2 = hl.read_table(resource('range-table-2000-with-10-parts.ht'), _intervals=[
             hl.Interval(start=150, end=250, includes_start=False, includes_end=True),
             hl.Interval(start=250, end=500, includes_start=False, includes_end=True),
         ], _filter_intervals=True, _create_row_uids=True)

diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/README.txt b/hail/src/test/resources/range-table-2000-with-10-parts.ht/README.txt
@@ -0,0 +1,3 @@
+This folder comprises a Hail (www.hail.is) native Table or MatrixTable.
+  Written with version 0.2.117-de0eaaaa19b4
+  Created at 2023/06/09 17:09:13
diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/_SUCCESS b/hail/src/test/resources/range-table-2000-with-10-parts.ht/_SUCCESS
diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/globals/metadata.json.gz b/hail/src/test/resources/range-table-2000-with-10-parts.ht/globals/metadata.json.gz
diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/globals/parts/part-0 b/hail/src/test/resources/range-table-2000-with-10-parts.ht/globals/parts/part-0
diff --git a/...-table-2000-with-10-parts.ht/index/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b.idx/index b/...-table-2000-with-10-parts.ht/index/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b.idx/index
diff --git a/...-with-10-parts.ht/index/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4.idx/index b/...-table-2000-with-10-parts.ht/index/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4.idx/index
diff --git a/...-with-10-parts.ht/index/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf.idx/index b/...-table-2000-with-10-parts.ht/index/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf.idx/index
diff --git a/...-with-10-parts.ht/index/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64.idx/index b/...-table-2000-with-10-parts.ht/index/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64.idx/index
diff --git a/...-with-10-parts.ht/index/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40.idx/index b/...-table-2000-with-10-parts.ht/index/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40.idx/index
diff --git a/...-with-10-parts.ht/index/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358.idx/index b/...-table-2000-with-10-parts.ht/index/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358.idx/index
diff --git a/...-with-10-parts.ht/index/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a.idx/index b/...-table-2000-with-10-parts.ht/index/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a.idx/index
diff --git a/...-with-10-parts.ht/index/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1.idx/index b/...-table-2000-with-10-parts.ht/index/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1.idx/index
diff --git a/...-with-10-parts.ht/index/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-08-c767e389-084d-4472-8402-ebffac537ad8.idx/index b/...-table-2000-with-10-parts.ht/index/part-08-c767e389-084d-4472-8402-ebffac537ad8.idx/index
diff --git a/...-with-10-parts.ht/index/part-08-c767e389-084d-4472-8402-ebffac537ad8.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-08-c767e389-084d-4472-8402-ebffac537ad8.idx/metadata.json.gz
diff --git a/...-table-2000-with-10-parts.ht/index/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482.idx/index b/...-table-2000-with-10-parts.ht/index/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482.idx/index
diff --git a/...-with-10-parts.ht/index/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482.idx/metadata.json.gz b/...-with-10-parts.ht/index/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482.idx/metadata.json.gz
diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/metadata.json.gz b/hail/src/test/resources/range-table-2000-with-10-parts.ht/metadata.json.gz
diff --git a/hail/src/test/resources/range-table-2000-with-10-parts.ht/rows/metadata.json.gz b/hail/src/test/resources/range-table-2000-with-10-parts.ht/rows/metadata.json.gz
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b b/...range-table-2000-with-10-parts.ht/rows/parts/part-00-e7962690-b55f-41a6-bd00-c032aaaf3c8b
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4 b/...range-table-2000-with-10-parts.ht/rows/parts/part-01-3a2ed385-c75d-431d-a9ce-07d3b055d2b4
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf b/...range-table-2000-with-10-parts.ht/rows/parts/part-02-3c0db806-33ed-4381-ae05-f1e1bc1864cf
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64 b/...range-table-2000-with-10-parts.ht/rows/parts/part-03-4e60f64b-6ccb-45ac-b4bc-619cd8595b64
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40 b/...range-table-2000-with-10-parts.ht/rows/parts/part-04-9db9c670-a874-4881-b3ce-90e3498a6a40
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358 b/...range-table-2000-with-10-parts.ht/rows/parts/part-05-bbbd3380-3fc2-4682-95f7-e04364b3e358
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a b/...range-table-2000-with-10-parts.ht/rows/parts/part-06-fcf403cf-cef9-4bcb-85b6-ff960e58b38a
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1 b/...range-table-2000-with-10-parts.ht/rows/parts/part-07-5fbdaf1e-ac8c-4519-b171-49aea130d1d1
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-08-c767e389-084d-4472-8402-ebffac537ad8 b/...range-table-2000-with-10-parts.ht/rows/parts/part-08-c767e389-084d-4472-8402-ebffac537ad8
diff --git a/...range-table-2000-with-10-parts.ht/rows/parts/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482 b/...range-table-2000-with-10-parts.ht/rows/parts/part-09-3b3b29d3-967d-4f6e-941e-88d3a02d6482