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dev-python/pyBigWig: version bump 0.3.24, add tests, remove outdated ebuilds #1318
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,2 +1 @@ | ||
| DIST pyBigWig-0.3.17.tar.gz 65490 BLAKE2B 5ae3ad5792357ae36082022aa34548fb7ad105909eccc27305064f8f948714f462e1d239c3af7f9b75b84f5658bcb03231d7d1d3b0ebc8025c96d2e7835f1bfb SHA512 b52fec3a85984708660dd454f5569900a5cce7804d02e719bddbdc7ed2f9f4ab1131e55b0a01ae977b18bb0bbd079e13ec887d5df108d8abfebdd04ad56e503f | ||
| DIST pyBigWig-0.3.18.tar.gz 66478 BLAKE2B 0d2e20bed5f59fb8c79026f453c4d5c3e4f9b663e96614b3ef8cbb939357c8895edfa92184da018efdd40e14bbf357f13cc32f898d9cf89419382e7be89b01c8 SHA512 e782f059a8c47043498b2c4b1c0b63f3a1863d03f641c469995536bded220714c61fe0a2f1dbe5841152fe54d0d43b544e14ec4999447d4d808e01b452fa5e88 | ||
| DIST pyBigWig-0.3.24.tar.gz 67280 BLAKE2B 3c6b0129eaf82d848d6bca9c78966cb106b53b50ee9551f2bef88e775f0b97d80248a6f1cd11a5f96819c836a36078d107d57683dd37a63b2e0ad49e5d52af77 SHA512 ff08fc987e9320b6c33d57da92ec8f5dcede2fbbafb0cb6a03eb0537da7312d8b7a4aabd30c7ae1cc7e6c9554b7d08654444b1141ee1df944e6d6de957e3d6c0 |
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| # Copyright 1999-2025 Gentoo Authors | ||
| # Distributed under the terms of the GNU General Public License v2 | ||
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| EAPI=8 | ||
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| PYTHON_COMPAT=( python3_{10..12} ) | ||
| DISTUTILS_USE_PEP517=setuptools | ||
| export SETUPTOOLS_SCM_PRETEND_VERSION=${PV} | ||
| inherit distutils-r1 | ||
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| DESCRIPTION="quick access to and creation of bigWig files" | ||
| HOMEPAGE="https://github.com/deeptools/pyBigWig" | ||
| SRC_URI="https://github.com/deeptools/pyBigWig/archive/${PV}.tar.gz -> ${P}.tar.gz" | ||
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| LICENSE="MIT" | ||
| SLOT="0" | ||
| KEYWORDS="~amd64 ~x86" | ||
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| REPEND=" | ||
| sys-libs/zlib:0= | ||
| sci-biology/libBigWig | ||
| " | ||
| DEPEND="${RDEPEND}" | ||
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| distutils_enable_tests pytest | ||
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| python_test() { | ||
| local pysite="${BUILD_DIR}"/install/${EPREFIX}/usr/lib/${EPYTHON}/site-packages | ||
| ln -s "${S}"/pyBigWigTest/test.bigBed "${pysite}"/pyBigWigTest || die | ||
| ln -s "${S}"/pyBigWigTest/test.bw "${pysite}"/pyBigWigTest || die | ||
| epytest pyBigWigTest/test.py | ||
| } | ||
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I'm not sure if there is a better way than linking
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What about setting
PYTHONPATH?There was a problem hiding this comment.
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The problem here is that:
os.path.dirname(pyBigWig.__file__) + "/pyBigWigTest/test.bigBed"pyBigWigonly exists as.sofile in the build directory (without those files)PYTHONPATHdoesn't change the file path construction of the formerThere was a problem hiding this comment.
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DISTUTILS_IN_SOURCE_BUILD=1might help here.There was a problem hiding this comment.
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I'm getting:
DISTUTILS_IN_SOURCE_BUILDis not supported in PEP517 modeThere was a problem hiding this comment.
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Right, let's just keep it as it is then.