imageStitch.wiki

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Xiaoxiao Liu edited this page Mar 30, 2015 · 1 revision

Check out location

	svn co https://svn.janelia.org/penglab/projects/vaa3d/trunk/released_plugins/v3d_plugins/istitch

Test Data

        http://penglab.janelia.org/proj/stitching/supp/supp_index.htm

Usage

menu

Pairwise Image Stitching
Group Image Stitching
batch Group Image Stitching
batch generate rawdata from tc file
Check voxel intensity at a XYZ location
Region Navigating
open test data web page
HIDDEN_3DROI_Navigation
About

func

v3dstitch
istitch-subspace
istitch-grouping
istitch-gc
help

   Usage: v3d -x imageStitch -f v3dstitch -i <input_image_folder> -o <output_image_file> -p 
     "[#c <channalNo_reference> #x <downsample_factor_x> #y <downsample_factor_y> #z <downsample_factor_z> 
     #l <overlap_ratio> #sb <saving_tile_boundary 0/1> #si <saving_stitching_result 0/1>]"