Remove infection from yii app example (#479)

PHP 8.4 is not yet supported in infection plugin by @Roave as we found
out in PHP-CMSIG/search#478 @szepeviktor.

So we will remove the unneeded infection part of the example to make the
CI green again.

Else I tried where possible to update the composer.json to match current
state of https://github.com/yiisoft/app with changes by @vjik and the
yii team.

This PR will update all deps also to the latest version.

Co-authored-by: Viktor Szépe <[email protected]>
Co-authored-by: Sergei Predvoditelev <[email protected]>