Convert vhGM and vhml to kg s-1 #164
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adcroft
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Dec 19, 2020
- PR to main from NCAR - Adds diagnostics - NOAA-GFDL/MOM6@0f664aa82 Merge pull request #1275 from gustavo-marques/main-candidate-ncar-2020-12-15 - NOAA-GFDL/MOM6@9d04f3849 Sets CS%limiter_remap=.false. in near_boundary_unit_tests - NOAA-GFDL/MOM6@5739a3413 Merge branch 'delete_fotgotten_code_LBD' into main-candidate-ncar-2020-12-15 - NOAA-GFDL/MOM6@51ed387ae Delete forgotten code - NOAA-GFDL/MOM6@42d79c204 Merge branch 'main' into main-candidate-ncar-2020-12-15 - NOAA-GFDL/MOM6@eddbd6c09 Merge pull request #164 from gustavo-marques/LBD_regrid_merged_10nov2020 - NOAA-GFDL/MOM6@cf97095bd Fix bug in linear decay and set F_layer = 0 below htot_max - NOAA-GFDL/MOM6@8215b70d0 Merge pull request #163 from NCAR/stdout - NOAA-GFDL/MOM6@0c1680555 Merge pull request #168 from kshedstrom/gnu_fix - NOAA-GFDL/MOM6@37cea3690 A few fixes to get it to compile with gfortran. - NOAA-GFDL/MOM6@acdfdda71 Fix unit tests and declare max_depth - NOAA-GFDL/MOM6@ad9862b40 Set maximum depth of the LBD grid - NOAA-GFDL/MOM6@5ac184667 Merge pull request #165 from NCAR/deferred_char_len - NOAA-GFDL/MOM6@7a5a0f768 real_array_string to deferred length - NOAA-GFDL/MOM6@95271cdfb change mesg character var to be deferred length to prevent record overflow - NOAA-GFDL/MOM6@d5c87fc5a change left_reals character var to be deferred length to prevent record overflow - NOAA-GFDL/MOM6@fa2b4249b Undo chages in tracer_example and MOM_tracer_flow_control - NOAA-GFDL/MOM6@aa27f1c8e Add LBD clock, clean up, and document module - NOAA-GFDL/MOM6@48616d86a Delete uncessary comments - NOAA-GFDL/MOM6@11cc3dc5c Undo changes related to check_grid_def - NOAA-GFDL/MOM6@f5abc66b7 Fix bug in linear decay - NOAA-GFDL/MOM6@f0d8a4ae1 Merge branch 'dev/ncar' into HEAD - NOAA-GFDL/MOM6@3f092914e replace iso_fortran_env::stdout with MOM_io::stdout - NOAA-GFDL/MOM6@1269874f2 change all 'write(*,..' to 'write(stdout,...' - NOAA-GFDL/MOM6@cc82d1154 use MOM_io::stdout in MCT cap instead of glb%stdout or FMS stdout - NOAA-GFDL/MOM6@30fac75c0 introduce public module ints stdout and stderr for standard output - NOAA-GFDL/MOM6@165b1b27a Merge pull request #160 from gustavo-marques/merge-main-candidate-2020-09-18 - NOAA-GFDL/MOM6@9fbc3e663 Merge pull request #6 from NOAA-GFDL/main-candidate-2020-09-18 - NOAA-GFDL/MOM6@300b6e9cf Option to apply limiter in native and LBD grids - NOAA-GFDL/MOM6@60559ecc1 Code cleaning - NOAA-GFDL/MOM6@9fb6f7527 Fix unit tests - NOAA-GFDL/MOM6@e484bc87a Add option to set maximum value in subrotine unique - NOAA-GFDL/MOM6@3df9dbcc7 Merge branch 'dev/ncar' into merge-regrid_LBD - NOAA-GFDL/MOM6@9e7b08973 Improve flux limiter - NOAA-GFDL/MOM6@a962325d8 Add option to apply flux limiter - NOAA-GFDL/MOM6@4235bb2fc Merge pull request #159 from gustavo-marques/add_u_v_squared_diags - NOAA-GFDL/MOM6@ddbd9c7ae Merge pull request #158 from gustavo-marques/dev-master-candidate-ncar-2020-08-11 - NOAA-GFDL/MOM6@f0face43f Adds missing args for KPP_get_BLD and energetic_PBL_get_MLD - NOAA-GFDL/MOM6@87ba533e4 Adds missing args for KPP_get_BLD and energetic_PBL_get_MLD - NOAA-GFDL/MOM6@2538c4d2a Improve the merging of interfaces - NOAA-GFDL/MOM6@f444affd3 Comment out write statements - NOAA-GFDL/MOM6@4ab4a7af7 Remove hard-coded BLD and uncomment code for adv and PGF - NOAA-GFDL/MOM6@365b298be Cleanup + add unit tests - NOAA-GFDL/MOM6@e537ef233 Add option to initialize passive tracer from z file - NOAA-GFDL/MOM6@40136b6d2 Passes GV to lateral_boundary_diffusion_init - NOAA-GFDL/MOM6@441c34ef4 Define vertical grid on-the-fly using h's and BLDs - NOAA-GFDL/MOM6@75c587e5f Major re-arragement to remap u- and v-fluxes - NOAA-GFDL/MOM6@593ebfc1d Delete fluxes_bulk_method - NOAA-GFDL/MOM6@e0db9abcb Fix typo when posting vsq - NOAA-GFDL/MOM6@1849bccd4 Adding option to output u^2, v^2 and u*v - NOAA-GFDL/MOM6@5c56268ea Adding options to specify dz to apply LBD @ top - NOAA-GFDL/MOM6@fa376e4da Merge branch 'LBD_idealized_experiments2' into regrid_LBD - NOAA-GFDL/MOM6@2a8096497 First attempt to use remapping in LBD - NOAA-GFDL/MOM6@d8ae09f80 Rename lateral_boundary_diffusion_CS to lbd_CS - NOAA-GFDL/MOM6@9957e55c6 Fix bug in loop-indices when using discontinuous ND and interior_only - NOAA-GFDL/MOM6@1fd53935d Fix bug in loop-indices when applying linear decay - NOAA-GFDL/MOM6@a49954a73 comment calls to BLD schemes - NOAA-GFDL/MOM6@7e390593c Merge branch 'dev/ncar' into LBD_idealized_experiments - NOAA-GFDL/MOM6@09ad69505 Add option to apply linear decay at the base of hbl - NOAA-GFDL/MOM6@7299d8653 Fix bug when applying ND only in the interior - NOAA-GFDL/MOM6@92581e2be Minor improvements in the bulk method - NOAA-GFDL/MOM6@9dc47208a Add option to apply linear decay at the base of hbl - NOAA-GFDL/MOM6@3b121cbcd Merge branch 'fix_LBD_tests' into LBD_idealized_experiments - NOAA-GFDL/MOM6@51a4d2e11 Apply a linear transition in LBD methods 1, 2 - NOAA-GFDL/MOM6@b5132d99d Modifications to run idealized two-column LBD - NOAA-GFDL/MOM6@a446d0fb2 Remove dependence on the boundary layer scheme
OlgaSergienko
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Dec 29, 2020
…ed_10nov2020 Major updates to the LBD module
adcroft
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Mar 9, 2022
- Rolled forward src/MOM6 and src/SIS2 to head of main circa Jan/Feb 2022. SIS2 commits since last sync to main: - NOAA-GFDL/SIS2@236fa72 (HEAD -> main, origin/main) Fix the result of a bad automated merge - NOAA-GFDL/SIS2@87ff9e5 Merge pull request #164 from Hallberg-NOAA/fix_unit_descriptions - NOAA-GFDL/SIS2@f020bba Merge branch 'dev/gfdl' into fix_unit_descriptions - NOAA-GFDL/SIS2@94ac8bd Merge pull request #163 from Hallberg-NOAA/stock_0degC - NOAA-GFDL/SIS2@b926925 Merge pull request #165 from Hallberg-NOAA/sum_output_cleanup - NOAA-GFDL/SIS2@9d0329a (*)Correct SIS summed output, including salt units - NOAA-GFDL/SIS2@d18605e Fixed 15 more variable unit descriptions - NOAA-GFDL/SIS2@41c76d8 Corrected spelling errors in comments - NOAA-GFDL/SIS2@98e926e Corrected comments in SIS_tracer_advect.F90 - NOAA-GFDL/SIS2@dde02fb Fixed 28 variable unit descriptions - NOAA-GFDL/SIS2@b6a9dfd +(*)Report heat stocks relative to liquid at 0 degC - NOAA-GFDL/SIS2@4e2454b Merge branch 'ridging_CS' into dev/gfdl - NOAA-GFDL/SIS2@ed5f20a Merge branch 'ridging_CS' of https://github.com/ESMG/SIS2 into ridging_CS - NOAA-GFDL/SIS2@04ab05d +Rescale G%Rad_Earth and set it via dG%Rad_Earth_L - NOAA-GFDL/SIS2@0cb6a0a Use allocate with source to initialize arrays - NOAA-GFDL/SIS2@e55a3eb Add a ridging control structure. - NOAA-GFDL/SIS2@ae2b2e3 Attempting to add a control structure for ridging - NOAA-GFDL/SIS2@0dc7d86 Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg - NOAA-GFDL/SIS2@906d26c Merge pull request #159 from marshallward/eos_ptr_removal - NOAA-GFDL/SIS2@55032ff MOM EOS pointer API update - NOAA-GFDL/SIS2@1c02a8f Add ice mass by category to diag options. - NOAA-GFDL/SIS2@e3b5574 Merge pull request #156 from Hallberg-NOAA/fix_set_massless_tracer_arg - NOAA-GFDL/SIS2@297ff46 +Change opt. arg. to set_massless_SIS_tracers MOM6 commits since last sync to main: - NOAA-GFDL/MOM6@e5563478 Improved fix for detecting symmetric mode output in refineDiag_ocean_month.py Update symmetric mode test to handle 2D or 3D input data. Also, check that the data and mask are 2 or 3D and 2D, respectively. - NOAA-GFDL/MOM6@f5a84968 Fix for detecting symmetric mode output in refineDiag_ocean_month.py The data has shape of TIME,Y,X and the mask has shape of Y,X, so the symmetric mode check should compare the 2nd index for the data and the 1st index for the mask. If the mask Y value is one greater than the data Y value, then the output is symmetric. - NOAA-GFDL/MOM6@6d9a98ef Update for locating basin codes in MOM6_refineDiag.csh The script currently looks for the codes in basin_codes.nc which does not exist in FRE output normally. Many FRE XMLs add basin_codes.nc to the history output before output staging, so the basin codes appear alongside the other history files with the YYYYMMDD.basin_codes.nc name. This update to the refineDiag wrapper script uses the YYYYMMDD.basin_codes.nc file as the basin codes if it exists. - NOAA-GFDL/MOM6@ef61d50c MOM6: (*)Updated version of MOM6 after MOM6 PR #41 - NOAA-GFDL/MOM6@95221af5 MOM6: (*)Updated version of MOM6 and MOM_parameter_doc files - NOAA-GFDL/MOM6@5ac8a699 Merge pull request #348 from Hallberg-NOAA/update_SIS2_version - NOAA-GFDL/MOM6@0aa93483 Updated version of SIS2 and MOM_parameter_doc files - NOAA-GFDL/MOM6@0b6dd99e MOM6: Fixes an uninitialized logical in FMS_cap - NOAA-GFDL/MOM6@611d6e6b SIS2: +Rescale G%Rad_Earth and set it via dG%Rad_Earth_L - NOAA-GFDL/MOM6@b5d2fa34 SIS2: Use allocate with source to initialize arrays - NOAA-GFDL/MOM6@f9377ca3 MOM6: +Rescale tides and ramp-up times - NOAA-GFDL/MOM6@1611c5c0 MOM6: Adding temperature restore capability for SPEAR. (#36) - NOAA-GFDL/MOM6@85556792 MOM6: +Obsolete ETA_TOLERANCE_AUX - NOAA-GFDL/MOM6@f05469d5 MOM6: change conversion H_to_MKS to H_to_m for u/veffA - NOAA-GFDL/MOM6@11dd3dff Add omitted file to "Merge in recent minor updates" - NOAA-GFDL/MOM6@d14218c5 MOM6 & SIS2: Merge in recent minor updates - NOAA-GFDL/MOM6@31114023 MOM6: (*)Fix compile-time issues with MOM_sum_driver.F90 - NOAA-GFDL/MOM6@7e56f0e8 MOM6: +Argument cleanup in vertical diffusivity code - NOAA-GFDL/MOM6@5d0c027e MOM6: Update available_diags and MOM_parameter_doc files - NOAA-GFDL/MOM6@e2bebd2b MOM6: Refactored solo_driver/MOM_driver.F90 - NOAA-GFDL/MOM6@109e7898 MOM6: +(*)Fix bug when RES_SCALE_MEKE_VISC = True (#1512) - NOAA-GFDL/MOM6@2276c470 MOM6: +Add new parameter FATAL_INCONSISTENT_RESTART_TIME (#1511) - NOAA-GFDL/MOM6@271ab0b0 MOM6: +*Change defaults for 3 parameters to better values (#1509) - NOAA-GFDL/MOM6@a90da93d MOM6: Done with EPBL docs? - NOAA-GFDL/MOM6@8c6c667f MOM6: Particle API (#1504) - NOAA-GFDL/MOM6@c138c521 MOM6: +Add BAROTROPIC_TIDAL_SAL_BUG to fix a tide bug - NOAA-GFDL/MOM6@c3c46494 Merge pull request #344 from Hallberg-NOAA/set_default_params - NOAA-GFDL/MOM6@10f46fd8 Explicitly set 3 parameters to default values - NOAA-GFDL/MOM6@f5d708bc MOM6: Testing: Generalized dimension testing
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We need to convert vhGM and vhml to kg s-1
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