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Release 6.4.3#1594

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wpbonelli merged 223 commits intomasterMODFLOW-ORG/modflow6:masterfrom v6.4.3MODFLOW-ORG/modflow6:v6.4.3Copy head branch name to clipboardFeb 7, 2024

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Commits on Jun 29, 2023

• ci(release): update version to 6.4.2+, reset IDEVELOPMODE to 1

  

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• ci(release): fix benchmark.py to accommodate ostag in asset name

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• Merge pull request #1281 from MODFLOW-USGS/post-release-6.4.2-reset

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Commits on Jun 30, 2023

• feat(par): reduce virtual memory by deactivating models and exchanges outside halo (#1285)

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Commits on Jul 1, 2023

• - validate connection parallel-proof (activated again) (#1288)

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Commits on Jul 5, 2023

• - fix convergence table in num. sol. for other processes than rank 0 (#1289)

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Commits on Jul 11, 2023

• build(deps): bump actions/upload-pages-artifact from 1 to 2 (#1295)

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Commits on Jul 14, 2023

• ci(release): reinit release notes, update dist scripts (#1283)

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• feat(par): add Newton underrelaxation convergence check for parallel (#1296)

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Commits on Jul 16, 2023

• doc(hpc): update HPC README (#1297)

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Commits on Jul 17, 2023

• ci: correct version str check in check_dist.py (#1299)

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• ci: fix execute permission and dist check (#1300)

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Commits on Jul 19, 2023

• feat(ArrayReaders): add better error trapping for binary input data (#1301)

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Commits on Jul 20, 2023

• docs(developer): add section on git strategy for feature branches (#1305)

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• fix(par_nur_has_converged): set mpi_world using get_mpi_world() (#1304)

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Commits on Jul 24, 2023

• docs: describe building and testing makefiles in DEVELOPER.md (#1307)

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Commits on Jul 26, 2023

• fix(backspace): remove Fortran backspace (#1310)

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• fix(msvs): msvs project file needs to be updated for backspace change (#1312)

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Commits on Jul 28, 2023

• feat(pak_cc): add support for parallel package convergence (#1309)

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• feat(sfr): add support for CELLIDs with zero values for unconnected reaches (#1311)

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• ci: test with gfortran 13 (#1298)

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Commits on Jul 29, 2023

• ci: expand Intel testing, use awvwgk/setup-fortran (#1303)

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Commits on Aug 2, 2023

• docs(DEVELOPER.md): add intel compat table, describe branching model, update TOC (#1320)

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Commits on Aug 3, 2023

• refactor(LAK): specify no lake bed using DNODATA (#1321)

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Commits on Aug 4, 2023

• ci(large models): use setup-fortran, expand matrix, fix intel caching on Windows (#1322)

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Commits on Aug 5, 2023

• test: define targets in conftest.py, refactor devtools usages (#1327)

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Commits on Aug 7, 2023

• fix(build_docs.py): filter benchmark artifacts by branch (#1330)

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Commits on Aug 8, 2023

• docs: add PR template, update bug report template (#1324)

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Commits on Aug 10, 2023

• fix(imscsv): fix issue with csv solver output in parallel (#1326)

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Commits on Aug 15, 2023

• fix(autotests): update use of unit_conversion to length_conversion and time_conversion (#1282)

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Commits on Aug 17, 2023

• ci(release): track deprecations (#1329)

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• docs: constrain sphinx and sphinx-rtd-theme versions (#1333)

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Commits on Aug 19, 2023

• docs(conf.py): use html_css_files instead of html_context (#1334)

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• docs: fix ReadTheDocs styles

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Commits on Aug 21, 2023

• fix(lak,sfr,uzf): fix nullptr when deallocating package in validate mode (#1331)

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Commits on Aug 25, 2023

• docs: update deprecated config in .readthedocs.yml (#1336)

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Commits on Sep 5, 2023

• ci: bump actions/checkout from 3 to 4 (#1341)

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• fix(dbg): symbols were no longer included (#1340)

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• ci: add gitlab config for automatic denali build (#1339)

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Commits on Sep 7, 2023

• fix(par): backtracking was out of sync (#1343)

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Commits on Sep 8, 2023

• refactor(transportModel.f90): Move and rename generalized transport model class (#1345)

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• fix(gwf3vsc8.f90): fix for the text header in the vsc package's binary output file (#1344)

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• refactor(fmi): introduce FlowModelInterface module/type, use for gwt (#1332)

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Commits on Sep 13, 2023

• fix(docs): list-based recharge example has an error (#1349)

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Commits on Sep 14, 2023

• chore: fix comment in .fprettify.yaml (#1351)

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Commits on Sep 18, 2023

• refactor(fmi): reduce unneeded duplication (#1350)

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Commits on Sep 19, 2023

• refactor(disv): improve cell area calculation (#1347)

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• docs(mf6io): fix discrepancy in LAK and MAW descriptions for RATE variable (#1354)

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Commits on Sep 22, 2023

• docs(mf6io): standardize variable name of the feature IDs in SFR (#1356)

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• feat(idm): support list and grid based input for base stress packages (#1337)

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• docs(mf6io): standardize variable name of the feature ID in the LAK & LKT dfn files (#1359)

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• docs(mf6io): standardize variable name of the feature ID in the MAW & MWT dfn files (#1360)

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Commits on Sep 24, 2023

• ci(msvs): workflow to verify msvs project files are complete (#1365)

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Commits on Sep 26, 2023

• feat(csub): add z-displacement support for disu grids (#1358)

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• docs(mf6io): standardize variable name of the feature ID in the UZF & UZT dfn files (#1361)

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• feat(idm): update CHD to source static and dynamic list input from the input context (#1366)

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Commits on Sep 27, 2023

• fix(idm): delay reading first period block variable until tdis has been created (#1370)

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Commits on Sep 28, 2023

• fix(VirtualDataManager): allow new model to work without virtual support (#1371)

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• ci: enable colorful pytest output (#1374)

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Commits on Sep 29, 2023

• feat(idm): update WEL package for IDM (#1372)

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• rfct(solution): encapsulate convergence params (#1353)

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• ci: add ps1 and ps2 example problems as autotests (#1377)

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• feat(idm): update DRN package for IDM (#1375)

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Commits on Sep 30, 2023

• feat(idm): update RIV package for IDM (#1378)

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Commits on Oct 2, 2023

• feat(idm): update GHB package for IDM (#1379)

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Commits on Oct 3, 2023

• refactor: generalize routine to disable development features (#1384)

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• feat(idm): update RCH package for IDM (#1380)

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• docs: fix typos in docstrings and comments (#1383)

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• feat(idm): update EVT package for IDM (#1385)

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Commits on Oct 4, 2023

• feat(pandas list): flopy dfn changes to support pandas basic list (#1376)

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Commits on Oct 6, 2023

• feat(ArrayHandlers): add 2D array expansion interface (#1382)

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Commits on Oct 7, 2023

• refactor(tsp): Elevate FMI to generalized transport class (#1386)

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Commits on Oct 11, 2023

• refactor(tsp): Elevate ADV to generalized transport class (#1391)

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• refactor: use python <= 3.11 for bmipy compatibility (#1394)

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Commits on Oct 12, 2023

• fix(idm): remove unintended setting of input package sfac param (#1395)

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• refactor(tsp): Elevate IC to generalized transport class (#1392)

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• docs(mf6io): update evta and rcha period block loading behavior (#1397)

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• refactor(tsp): Elevate OC to generalized transport class (#1396)

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• refactor(tsp): Elevate SSM to generalized transport class (#1392) (#1398)

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Commits on Oct 13, 2023

• refactor(tsp): Elevate MVT to generalized transport class (#1399)

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• refactor(tsp): Elevate OBS to generalized transport class (#1400)

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Commits on Oct 16, 2023

• misc(gwt1.f90): remove commented code and supplement doxygen comment (#1402)

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• ci: remove branch filters from push trigger (#1401)

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Commits on Oct 17, 2023

• feat(par): a first test for parallel GWT (#1355)

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• test(ArrayHandlers): add unit tests via optional framework (#1403)

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• feat(InputOutput.f90): Introduce padl, a string manipulation function (#1405)

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• fix(InputOutput): address issue appending processor id for new intel … (#1393)

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Commits on Oct 18, 2023

• fix(hpc): set execute permission on deploy script (#1406)

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Commits on Oct 19, 2023

• ci: move compiler compatibility tests to separate workflow (#1390)

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• chore(deps): bump actions/checkout from 3 to 4 (#1408)

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Commits on Oct 20, 2023

• ci(release): make compiler toolchain/version configurable (#1325)

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Commits on Oct 22, 2023

• docs: update compiler compatibility tables (#1410)

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Commits on Oct 27, 2023

• build(meson): add support for NetCDF in meson build system (#1412)

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Commits on Oct 29, 2023

• docs: use relative links in markdown files (#1414)

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• feat(GeomUtil): add geometry module with point_in_polygon utility (#1407)

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Commits on Oct 30, 2023

• chore: unpin python<=3.11, mention Xcode 15 workaround in dev docs (#1415)

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Commits on Nov 1, 2023

• ci: add simple gwfgwf exchange model with sfr mover (#1418)

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Commits on Nov 2, 2023

• refactor: add model_reset for package movers (#1419)

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Commits on Nov 3, 2023

• feat(gwt1cnc1idm.f90): add IDM support for CNC (#1413)

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• Update README.md (#1422)

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• fix(gwf3chd8.f90): account for auxiliary multiplier value in IDM modifications to CHD (#1420)

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• refactor(idm): remove component level FoundType and param sfac constr… (#1421)

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• fix(GeomUtil): fix point_in_polygon, expand unit tests (#1423)

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Commits on Nov 6, 2023

• ci(hpc): fetch and checkout detached head (#1429)

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Commits on Nov 7, 2023

• chore(gwt1dsp1.f90): clean-up docstrings (#1431)

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• refactor(IC): integrate initial conditions pkg with IDM (#1425)

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Commits on Nov 9, 2023

• - fix mem leak from KSPBuildResidual in convergence check (#1435)

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• refactor(gwt1src1.f90): minor updates in source loading package (#1432)

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• refactor(tsp): Elevate APT to generalized transport class (#1428)

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• fix(petsc): this got activated in previous PR, but it is not ready for that (#1436)

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Commits on Nov 11, 2023

• refactor(idm): relocate model package lists to model modules (#1437)

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• test: move get_version fn to conftest.py from devtools (#1438)

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Commits on Nov 15, 2023

• fix(mf6io): fix FROM-MVR entry in MAW binary budget output table (#1443)

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• test: add minimal unit tests for some utilities (#1409)

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• feature(discretization): add get_polyverts routine to DIS/DISV (#1444)

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• refactor(tsp1.f90): move code from gwt1.f90 to tsp1.f90 (#1445)

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Commits on Nov 17, 2023

• refactor(meson): disable test-drive with intel compilers (#1449)

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Commits on Nov 18, 2023

• chore(gwf3maw8.f90): cleanup docstrings in MAW (#1448)

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• chore(gwf3maw8.f90): cleanup docstrings in MAW (#1450)

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• chore(discretization): cleanup docstrings in DIS/DISV/DISU (#1453)

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Commits on Nov 20, 2023

• chore(gwf3uzf8.f90): cleanup docstrings in UZF (#1454)

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• fix: update SFR diversion flow to zero when its upstream downflow is zero (#1467)

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Commits on Dec 7, 2023

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Commits on Dec 16, 2023

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• fix(gwfgwf): budget error when chd lives on border of exchange (#1537)

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• fix(idm): reset auxvar 2d arrray in array input loader each period (#1548)

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• docs(mf6io): update IDP documentation (#1550)

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• chore(deps): bump actions/cache from 3 to 4 (#1555)

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• docs(release): prepare release notes for 6.4.3 release (#1558)

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Commits on Jan 19, 2024

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• docs(releasenotes): remove known issue fixed by IDP (#1560)

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• fix(par): bug with print_input in exchange (#1561)

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• ci(developmode): dev_interface model tests need to be marked with developmode (#1563)

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Commits on Jan 22, 2024

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• feat(par): add mover functionality to parallel capabilities (#1427)

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• fix(dist): multiple fixes following review (#1573)

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Commits on Jan 26, 2024

• fix(chd): fix CHD rate and budget calculation for edge case with XT3D and exchanges (#1576)

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• fix IDM loading of exchanges (#1577)

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• chore(BudgetObject.f90): cleanup docstrings in BudgetObject utility (#1583)

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• mark DISU blocks VERTICES and CELL2D optional (#1580)

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• docs(release): update release notes (#1587)

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Commits on Feb 7, 2024

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• docs(mf6io): update mf6io markdown and tex files (#1591)

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• ci(release): update version to 6.4.3

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