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OOMKilled error in qualitycontrol-check-cmip6 with dodola validate-dataset #297

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brews opened this issue Nov 5, 2021 · 1 comment · Fixed by #298
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OOMKilled error in qualitycontrol-check-cmip6 with dodola validate-dataset #297

brews opened this issue Nov 5, 2021 · 1 comment · Fixed by #298
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brews commented Nov 5, 2021

After #296 we're getting OOMKilled (exit code 137) from workflows/templates/qualitycontrol-check-cmip6.yaml.

Logs give

INFO:dodola.services:Starting validate dodola service
INFO:dodola.repository:Read gs://downscaled-288ec5ac/stage/ScenarioMIP/NOAA-GFDL/GFDL-ESM4/ssp370/r1i1p1f1/day/ta
smax/gr1/v20211103182935.zarr
@brews brews added the bug label Nov 5, 2021
@brews brews self-assigned this Nov 5, 2021
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brews commented Nov 5, 2021

Looks like it's still reading in the entire zarr store and bombing when this zarr store is bigger than available memory.

I'll revert #296 to get things working again and then deal with this bug upstream in dodola.

brews added a commit that referenced this issue Nov 5, 2021
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Fix OOMKilled error in QC with dodola validate-dataset
135aa87 
close #297
This was referenced Nov 5, 2021
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@brews brews closed this as completed in #298 Nov 5, 2021
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Fix OOMKilled error in QC with dodola validate-dataset ClimateImpactLab/downscaleCMIP6
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