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Update release historical+concentrations configuration #88

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merged 14 commits into from
Aug 30, 2024
Merged

Update release historical+concentrations configuration #88

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08c6c17
Make new README
blimlim Aug 23, 2024
7e63d71
Update MOM5 diagnostic tables:
dougiesquire Aug 27, 2024
754d0b9
Merge pull request #76 from ACCESS-NRI/74-mom-diag-updates
dougiesquire Aug 28, 2024
fbc866b
Update to access-esm1p5 2024.05.1, remove unused BGC inputs
dougiesquire Aug 28, 2024
cfb60e3
Fix typo in README
dougiesquire Aug 28, 2024
476bbac
Merge pull request #80 from ACCESS-NRI/78-update-access-esm1.5
dougiesquire Aug 28, 2024
3242fe4
Remove timestep soil evap, add daily surface fluxes and runoff
blimlim Aug 28, 2024
7319b0d
merge changes from origin
blimlim Aug 28, 2024
79f98cf
Increase jobfs to 1500MB
blimlim Aug 29, 2024
dfff182
Merge pull request #84 from ACCESS-NRI/83-increase-jobfs-historical
blimlim Aug 29, 2024
fc80970
Merge pull request #81 from ACCESS-NRI/77-updates-hist-atmos-diags
blimlim Aug 29, 2024
4906a06
metadata.yaml: Updated version to '1.0' to match release-*
CodeGat Aug 30, 2024
2b7f762
Bumped version to 1.1 as part of https://github.com/ACCESS-NRI/access…
access-bot Aug 30, 2024
4356563
Merge branch 'release-historical+concentrations' into dev-historical+…
CodeGat Aug 30, 2024
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4 changes: 2 additions & 2 deletions README.md
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@@ -1,5 +1,5 @@
# historical+concentrations
Standard configuration for a coupled CO~2~ concentration driven [ACCESS-ESM1.5](https://github.com/ACCESS-NRI/ACCESS-ESM1.5) under historical forcings between 1850-2014.
Standard configuration for a coupled CO<sub>2</sub> concentration driven [ACCESS-ESM1.5](https://github.com/ACCESS-NRI/ACCESS-ESM1.5) under historical forcings between 1850-2014.

For usage instructions, see the [ACCESS-Hive docs](https://access-hive.org.au/models/run-a-model/run-access-esm/)

Expand All @@ -12,4 +12,4 @@ The developers of ACCESS-ESM1.5 request that users of this model configuration:
2. Include an acknowledgment such as the following:
"The authors thank CSIRO for developing the ACCESS-ESM1.5 model configuration and making it freely available to researchers."
ACCESS-NRI requests users follow the guidelines for acknowledging ACCESS-NRI and include a statement such as:
"This research used the ACCESS-ESM1.5 model infrastructure provided by ACCESS-NRI, which is enabled by the Australian Government's National Collaborative Research Infrastructure Strategy (NCRIS)."
"This research used the ACCESS-ESM1.5 model infrastructure provided by ACCESS-NRI, which is enabled by the Australian Government's National Collaborative Research Infrastructure Strategy (NCRIS)."
10 changes: 7 additions & 3 deletions atmosphere/diagnostic_profiles/STASHC_detailed_concentrations
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### Start of user STASH requests for ATMOS ###
&STASHNUM NUM_REQ= 295, NUM_DOM=37, NUM_TIM=20, NUM_USE=12 /
&STASHNUM NUM_REQ= 299, NUM_DOM=37, NUM_TIM=20, NUM_USE=12 /

# Monthly - 3D variables on model levels #
&STREQ IMOD= 1, ISEC=0, ITEM=4, IDOM=2, ITIM=3, IUSE=2 /
Expand Down Expand Up @@ -92,8 +92,7 @@
&STREQ IMOD= 1, ISEC=5, ITEM=214, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=5, ITEM=215, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=5, ITEM=216, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=223, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=229, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=223, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=296, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=297, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=8, ITEM=208, IDOM=1, ITIM=3, IUSE=2 /
Expand Down Expand Up @@ -291,6 +290,11 @@
&STREQ IMOD= 1, ISEC=5, ITEM=216, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=209, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=16, ITEM=222, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=217, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=223, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=234, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=234, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=235, IDOM=1, ITIM=1 IUSE=1 /

# Daily - 2D variables above surface #
&STREQ IMOD= 1, ISEC=2, ITEM=206, IDOM=1, ITIM=1, IUSE=1 /
Expand Down
8 changes: 6 additions & 2 deletions atmosphere/diagnostic_profiles/STASHC_standard_concentrations
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@@ -1,5 +1,5 @@
### Start of user STASH requests for ATMOS ###
&STASHNUM NUM_REQ= 242, NUM_DOM=37, NUM_TIM=20, NUM_USE=12 /
&STASHNUM NUM_REQ= 246, NUM_DOM=37, NUM_TIM=20, NUM_USE=12 /

# Monthly - 3D variables on model levels #
&STREQ IMOD= 1, ISEC=33, ITEM=1, IDOM=2, ITIM=3, IUSE=2 /
Expand Down Expand Up @@ -55,7 +55,6 @@
&STREQ IMOD= 1, ISEC=5, ITEM=215, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=5, ITEM=216, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=223, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=229, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=296, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=3, ITEM=297, IDOM=1, ITIM=3, IUSE=2 /
&STREQ IMOD= 1, ISEC=8, ITEM=208, IDOM=1, ITIM=3, IUSE=2 /
Expand Down Expand Up @@ -253,6 +252,11 @@
&STREQ IMOD= 1, ISEC=5, ITEM=216, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=209, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=16, ITEM=222, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=217, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=223, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=3, ITEM=234, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=234, IDOM=1, ITIM=1, IUSE=1 /
&STREQ IMOD= 1, ISEC=8, ITEM=235, IDOM=1, ITIM=1 IUSE=1 /

# Daily - 2D non-surface #
&STREQ IMOD= 1, ISEC=2, ITEM=206, IDOM=1, ITIM=1, IUSE=1 /
Expand Down
5 changes: 2 additions & 3 deletions config.yaml
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Expand Up @@ -19,13 +19,14 @@ laboratory: access-esm
jobname: historical
queue: normal
walltime: 2:30:00
jobfs: 1500MB

# Modules for loading model executables
modules:
use:
- /g/data/vk83/modules
load:
- access-esm1p5/2024.05.0
- access-esm1p5/2024.05.1

# Model configuration
model: access
Expand Down Expand Up @@ -75,8 +76,6 @@ submodels:
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/dust.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/share/ocean/biogeochemistry/global.1deg/2024.07.12/bgc_param.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/unused/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_fice_monthly_om1p5_bc.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/unused/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_xkw_monthly_om1p5_bc.nc
# Tides
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
- /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/tideamp.nc
Expand Down
6 changes: 3 additions & 3 deletions manifests/exe.yaml
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Expand Up @@ -12,7 +12,7 @@ work/ice/cice_access_360x300_12x1_12p.exe:
binhash: 818f213e53d30fc307b565c35939382c
md5: 04fd88249ebc16e3f560fc265838e9d1
work/ocean/fms_ACCESS-CM.x:
fullpath: /g/data/vk83/apps/spack/0.22/restricted/ukmo/release/linux-rocky8-x86_64_v4/intel-19.0.3.199/mom5-git.access-esm1.5_2024.06.20_access-esm1.5-wxxrc3ivrjz76yx565ddkuuiwoqpalko/bin/fms_ACCESS-CM.x
fullpath: /g/data/vk83/apps/spack/0.22/restricted/ukmo/release/linux-rocky8-x86_64_v4/intel-19.0.3.199/mom5-git.access-esm1.5_2024.08.23_access-esm1.5-ougudnkjcdkuuu6wuxne3uy7tr4y6oes/bin/fms_ACCESS-CM.x
hashes:
binhash: a7a3151fb1b814f9e94f05e637b86a44
md5: 241db68e6164fac77c59da99ffb1d3b1
binhash: 711dd9e382eee06aba1f38ce83f7e7d5
md5: 96863931103def85ed76b152ba01b5c1
10 changes: 0 additions & 10 deletions manifests/input.yaml
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Expand Up @@ -321,21 +321,11 @@ work/ocean/INPUT/grid_spec.nc:
hashes:
binhash: 20468cf509d14ec15c908f7fbd8b3de5
md5: b9adc1e552201aa3abc6efb72786ec93
work/ocean/INPUT/ocmip2_fice_monthly_om1p5_bc.nc:
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/unused/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_fice_monthly_om1p5_bc.nc
hashes:
binhash: 60f4723017d75ebe8a5bc5fe0f37ad1d
md5: c0ed75eef44962dbe6fc9f61dbd228a9
work/ocean/INPUT/ocmip2_press_monthly_om1p5_bc.nc:
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_press_monthly_om1p5_bc.nc
hashes:
binhash: d4b3605e8765d477b02a55d6ae21feac
md5: 2e71cbb78c052e06e3df20f862928da2
work/ocean/INPUT/ocmip2_xkw_monthly_om1p5_bc.nc:
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/unused/ocean/biogeochemistry/global.1deg/2020.05.19/ocmip2_xkw_monthly_om1p5_bc.nc
hashes:
binhash: 39f04199eedf0e3a6c638d890795311e
md5: 348a035bed83e280bb0a1de0066947fc
work/ocean/INPUT/roughness_amp.nc:
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/share/ocean/tides/global.1deg/2020.05.19/roughness_amp.nc
hashes:
Expand Down
6 changes: 6 additions & 0 deletions manifests/restart.yaml
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Expand Up @@ -76,6 +76,12 @@ work/ice/RESTART/mice.nc:
hashes:
binhash: 24ce8602876ab14e9607f4d4ed192f44
md5: 0085475b82f3e0876b7be9203538c97a
work/ice/RESTART/restart_date.nml:
copy: true
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/historical/restart/ice/restart_date.nml
hashes:
binhash: 97299fc009fe4b103eb21d4bca4fb413
md5: 9f914094ec1a3c39ad6384553f120f64
work/ocean/INPUT/README:
fullpath: /g/data/vk83/configurations/inputs/access-esm1p5/modern/historical/restart/ocean/README
hashes:
Expand Down
2 changes: 1 addition & 1 deletion metadata.yaml
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Expand Up @@ -24,5 +24,5 @@ nominal_resolution: 100 km
reference: https://doi.org/10.1071/ES19035
license: CC-BY-4.0
model: ACCESS-ESM1.5
version: '1.0'
version: '1.1'
url: https://github.com/ACCESS-NRI/access-esm1.5-configs.git
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