release 1.0.0 #232
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release 1.0.0 #232
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* Hard-link README.md images [skip ci] * Update CONTRIBUTING.md [skip ci]
* Update KNNClassifier tests to use datasets * Improve persistence test for HMMClassifier * Improve KNNClassifier persistence tests
* Initial template * Start new interface design * Progress * Progress * Progress * Remove from_arrays * Finish SequentialDataset and KNN* * Finish HMMClassifier fit * Comment for supporting pre-fitted HMMs * Progress * Docs improvements * Docs improvements * Fix topology * Start adding HMMClassifier docs * Rename HMM variant .rst files * Add intro to HMM Classifier page * Finish HMM Classifier * Pass normalize to score * Finish start of HMM docs page * Typo * Finish HMM main page * Finish HMM variants * Typo * Finish GMMHMM docs * Improvements * Fixes * Finish HMM docs * Finish DTW-kNN index page * Finish kNN docs * Finish model public docstrings and doc pages * Add KNNClassifier example * Add .npz files * Add autosummaries + finish existing datasets * Add HMMClassifier defaults * Finish datasets * Big changes * Add numba + other fixes * Fix CircleCI * Remove Python 3.5/3.6 * Fix versions * Remove Python 3.11 * Rearrange algorithms * Improve README.md * Hide base files * Hide preprocessing base * Remove Python 3.11 * Upgrade hmmlearn + add HMMClassifier save/load * Fix Sakoe-Chiba band * Add SequentialDataset.copy() * Add SequentialDataset.copy() * Update README.md
# Conflicts: # lib/sequentia/__init__.py
* create test files * Add topology tests * Remove base test files * finish hmm tests except classifier * finish HMM tests * fix zero check * finish models and data tests * finish digits tests * finish gene families tests * fix CI * setuptools CI fix * remove conda update * fix SequentialDataset docstrings
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Major changes
CategoricalHMMandGaussianMixtureHMMparameter defaults forparams/init_paramsbeing modified. (#231)CategoricalHMMandGaussianMixtureHMMunfreeze()callingsuper().freeze()instead ofsuper().unfreeze(). (#231)_KNNMixinwhenweighting=None. (#231)Minor changes
load_digitsnumbersparameter name todigits. (#231)SequentialDatasetproperties to not return copies of arrays. (#231)SequentialDataset.__eq__. (#231)HMMClassifierpriordefault toNone. (#231)