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@xomicsdatascience

Multiomics + Data Science Lab

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  1. transcriptome-proteome-nas-manubot transcriptome-proteome-nas-manubot Public

    HTML 5 1

  2. zoDIAq zoDIAq Public

    Cosine Similarity Optimization for DIA qualitative and quantitative analysis

    Python 3 4

  3. AttentionSmithy AttentionSmithy Public

    Modular toolkit for rapidly building and customizing transformer architectures.

    Python 2 1

  4. pscs pscs Public

    Platform for Single-Cell Science

    Python 1

  5. HT-Skm-Proteomics HT-Skm-Proteomics Public

    Jupyter Notebook 1

  6. typomancy typomancy Public

    Toolkit for converting HTML string input into Python types indicated by TypeHints

    Python 1

Repositories

Showing 10 of 24 repositories
  • AttentionSmithy Public

    Modular toolkit for rapidly building and customizing transformer architectures.

    xomicsdatascience/AttentionSmithy’s past year of commit activity
    Python 2 MIT 1 0 1 Updated Feb 21, 2025
  • machine-translation Public

    Replication of the "Attention Is All you Need" machine translation model using AttentionSmithy.

    xomicsdatascience/machine-translation’s past year of commit activity
    Python 1 MIT 0 0 1 Updated Feb 19, 2025
  • geneformer Public

    A recreation of the geneformer model using AttentionSmithy

    xomicsdatascience/geneformer’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 12, 2025
  • trajectory_review Public

    A repository for storing notebooks working through considerations relevant for trajectory inference.

    xomicsdatascience/trajectory_review’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Feb 12, 2025
  • RnaToProteinDataModule Public

    Classes for loading transcriptome and proteome data for deep learning model training.

    xomicsdatascience/RnaToProteinDataModule’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jan 29, 2025
  • Single-Cell-Storage Public
    xomicsdatascience/Single-Cell-Storage’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jan 21, 2025
  • FAIMS_MachineLearning Public Forked from Justin92/FAIMS_MachineLearning
    xomicsdatascience/FAIMS_MachineLearning’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Dec 18, 2024
  • subgroup_example2 Public

    Other

    xomicsdatascience/subgroup_example2’s past year of commit activity
    Python 0 0 0 0 Updated Nov 26, 2024
  • subgroup_example Public

    Adding remote repository

    xomicsdatascience/subgroup_example’s past year of commit activity
    0 0 0 0 Updated Nov 26, 2024
  • transcriptome-proteome-nas-manubot Public
    xomicsdatascience/transcriptome-proteome-nas-manubot’s past year of commit activity
    HTML 5 CC-BY-4.0 1 5 0 Updated Nov 11, 2024
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