Review website content (DS)

[dominiquesydow]

Description

Review (aka update) website content where I am involved.

Todos

• KiSSim: Only some text edits
• TeachOpenCADD
  • Update image
  • Add people (only those who are part of publications) and book chapter ref
  • Remove text on topics (to avoid duplications with TOC GH/website)
• KinFragLib: Figure update; Sonja's Custom-KinFragLib will be added in another PR (see issue 66)
• T2F-Flex/Pharm: Remove comment on WIP master thesis; Michele's work will be added in another PR (see issue 66)
• struc2drug
• OpenCADD: Add short description on OpenCADD's modules, remove plipify, add Julian's bachelor thesis
• Ratar: Only some text edits
• AI in Medicine: Minor change lock to GH icon since repo is now open access

Question

• @AndreaVolkamer include Sonja's KinFragLib work? How? TBD > another PR
• @AndreaVolkamer include links to Michele's T2F-Flex work? Thesis and GH? TBD > another PR
• @AndreaVolkamer what about TeachOpenCADD funding details - remove all? > yes, and add no-explicit-funding comment
• @AndreaVolkamer include Julian's OpenCADD work? How? TBD > will be added when finished
• @AndreaVolkamer Franzi's work on plipify is currently listed under OpenCADD, is now something independent, shall I remove this? https://volkamerlab.org/projects/opencadd/ > another PR

Status

• Ready to go

[dominiquesydow]

Hi @AndreaVolkamer, could you please take a look at how you would like to proceed with the open questions in this PR's description?
Happy to postpone some decisions for after this PR - in that case I'd open an issue so that we do not forget about it.

[AndreaVolkamer]

Questions:

include Sonja's KinFragLib work? How? TBD

yes, but we will have the respective students draft a short paragraph (I'll ping Sonja)

include links to Michele's T2F-Flex work? Thesis and GH? TBD

yes, I'll draft a paragraph, extracted from the thesis. GH repo is not public (yet)?

what about TeachOpenCADD funding details - remove all? https://volkamerlab.org/projects/teachopencadd/ TBD

Can you please add a sentence similar to the sentence in the TOC manuscript acknowledgements.

include Julian's OpenCADD work? How? TBD

yes, good idea, will forward this task to @corey-taylor, who can please ask Julian to provide a short paragraph.

Franzi's work on plipify is currently listed under OpenCADD, is now something independent, shall I remove this? https://volkamerlab.org/projects/opencadd/

Yes, due to time constraints this will live separate. Can you please remove it from openCADD for now. I - or with the help of @jaimergp or @schallerdavid - will add some info on this separately

[dominiquesydow]

include links to Michele's T2F-Flex work? Thesis and GH? TBD

yes, I'll draft a paragraph, extracted from the thesis. GH repo is not public (yet)?

@AndreaVolkamer correct, the GH repo is not public yet: https://github.com/volkamerlab/T2FFlexMDSimulations

what about TeachOpenCADD funding details - remove all? https://volkamerlab.org/projects/teachopencadd/ TBD

Can you please add a sentence similar to the sentence in the TOC manuscript acknowledgements.

Added.

Franzi's work on plipify is currently listed under OpenCADD, is now something independent, shall I remove this? https://volkamerlab.org/projects/opencadd/

Yes, due to time constraints this will live separate. Can you please remove it from openCADD for now. I - or with the help of @jaimergp or @schallerdavid - will add some info on this separately

Removed.