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added 18 commits
February 12, 2022 16:05
…reSettings to storages.
…database_has_different_definition".
and use a BackupEntriesBatch for Memort engine to improve performance. A lot of minor corrections.
…not only by name.
vitlibar
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Jul 7, 2022
This use-after-free can be reproduced with distributed queries.
Also note, that this is not sumMappedArray() and friends (that
previously called sumMap()) but Map combinator.
You will find ASan report in details.
<details>
READ of size 8 at 0x62d00012d218 thread T186 (QueryPipelineEx)
2022.07.03 05:09:40.000234 [ 31956 ] {} <Trace> AsynchronousMetrics: MemoryTracking: was 1.23 GiB, peak 1.23 GiB, will set to 1.25 GiB (RSS), difference: 19.51 MiB
2022.07.03 05:09:41.000137 [ 31956 ] {} <Trace> AsynchronousMetrics: MemoryTracking: was 1.25 GiB, peak 1.25 GiB, will set to 1.26 GiB (RSS), difference: 3.76 MiB
#0 0x1233a0d8 in DB::AggregateFunctionSumData<>::get() const build_docker/../src/AggregateFunctions/AggregateFunctionSum.h:245:16
#1 0x1233a0d8 in DB::AggregateFunctionSum<>::insertResultInto(char*, DB::IColumn&, DB::Arena*) const build_docker/../src/AggregateFunctions/AggregateFunctionSum.h:536:70
#2 0x1470f910 in DB::AggregateFunctionMap<char8_t>::insertResultInto() const build_docker/../src/AggregateFunctions/AggregateFunctionMap.h:236:26
#3 0x147110ce in DB::IAggregateFunctionHelper<>::insertResultIntoBatch() const build_docker/../src/AggregateFunctions/IAggregateFunction.h:618:53
#4 0x2c4269d7 in void DB::Aggregator::convertToBlockImplFinal<>() const build_docker/../src/Interpreters/Aggregator.cpp:1878:49
#5 0x2c403b9f in void DB::Aggregator::convertToBlockImpl<>() const build_docker/../src/Interpreters/Aggregator.cpp:1714:13
ClickHouse#6 0x2be09b53 in DB::Aggregator::prepareBlockAndFillSingleLevel() const::$_2::operator()() const build_docker/../src/Interpreters/Aggregator.cpp:2144:9
ClickHouse#7 0x2be09b53 in DB::Block DB::Aggregator::prepareBlockAndFill<>() const build_docker/../src/Interpreters/Aggregator.cpp:2000:5
ClickHouse#8 0x2be09b53 in DB::Aggregator::prepareBlockAndFillSingleLevel() const build_docker/../src/Interpreters/Aggregator.cpp:2150:12
ClickHouse#9 0x2be37de3 in DB::Aggregator::mergeBlocks() build_docker/../src/Interpreters/Aggregator.cpp:3032:17
ClickHouse#10 0x308c27f8 in DB::MergingAggregatedBucketTransform::transform() build_docker/../src/Processors/Transforms/MergingAggregatedMemoryEfficientTransform.cpp:360:37
0x62d00012d218 is located 3608 bytes inside of 32768-byte region [0x62d00012c400,0x62d000134400)
freed by thread T186 (QueryPipelineEx) here:
#0 0xd701312 in free (/work1/azat/tmp/upstream/clickhouse-asan+0xd701312) (BuildId: b7977aef37e9f720)
...
ClickHouse#8 0x2e3c22eb in DB::ColumnAggregateFunction::~ColumnAggregateFunction() build_docker/../src/Columns/ColumnAggregateFunction.cpp:89:1
...
ClickHouse#18 0xd9fcdd4 in std::__1::vector<DB::ColumnWithTypeAndName, std::__1::allocator<DB::ColumnWithTypeAndName> >::~vector() build_docker/../contrib/libcxx/include/vector:401:9
ClickHouse#19 0x2be373f4 in DB::Aggregator::mergeBlocks() build_docker/../contrib/libcxx/include/__memory/unique_ptr.h
ClickHouse#20 0x308c27f8 in DB::MergingAggregatedBucketTransform::transform() build_docker/../src/Processors/Transforms/MergingAggregatedMemoryEfficientTransform.cpp:360:37
previously allocated by thread T186 (QueryPipelineEx) here:
#0 0xd7015be in malloc (/work1/azat/tmp/upstream/clickhouse-asan+0xd7015be) (BuildId: b7977aef37e9f720)
#1 0xd85190a in Allocator<false, false>::allocNoTrack(unsigned long, unsigned long) build_docker/../src/Common/Allocator.h:227:27
#2 0xd988d45 in Allocator<false, false>::alloc(unsigned long, unsigned long) build_docker/../src/Common/Allocator.h:96:16
#3 0xd988d45 in DB::Arena::MemoryChunk::MemoryChunk(unsigned long, DB::Arena::MemoryChunk*) build_docker/../src/Common/Arena.h:54:64
#4 0xd98904b in DB::Arena::addMemoryChunk(unsigned long) build_docker/../src/Common/Arena.h:122:20
#5 0xec9542c in DB::Arena::alignedAlloc(unsigned long, unsigned long) build_docker/../src/Common/Arena.h:171:13
ClickHouse#6 0x1470f123 in DB::AggregateFunctionMap<char8_t>::deserialize() const build_docker/../src/AggregateFunctions/AggregateFunctionMap.h:205:35
</details>
P.S. Thanks to @den-crane for the reproducer.
Fixes: ClickHouse#35359 (cc @den-crane @dongxiao-yang)
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
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Sep 16, 2022
…yFunc()
clang-15 reports [1]:
<details>
<summary>ASan report</summary>
```
==1==ERROR: AddressSanitizer: stack-use-after-return on address 0x7f1d04c4eb20 at pc 0x000031c4803c bp 0x7f1d05e19a00 sp 0x7f1d05e199f8
READ of size 8 at 0x7f1d04c4eb20 thread T200 (QueryPullPipeEx)
#0 0x31c4803b in DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3::operator()(unsigned long) const build_docker/../src/Common/GetPriorityForLoadBalancing.cpp:42:40
#1 0x31c4803b in decltype(static_cast<DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3&>(fp)(static_cast<unsigned long>(fp0))) std::__1::__invoke<DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3&, unsigned long>(DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3&, unsigned long&&) build_docker/../contrib/libcxx/include/type_traits:3640:23
#2 0x31c4803b in unsigned long std::__1::__invoke_void_return_wrapper<unsigned long, false>::__call<DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3&, unsigned long>(DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3&, unsigned long&&) build_docker/../contrib/libcxx/include/__functional/invoke.h:30:16
#3 0x31c4803b in std::__1::__function::__default_alloc_func<DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3, unsigned long (unsigned long)>::operator()(unsigned long&&) build_docker/../contrib/libcxx/include/__functional/function.h:230:12
#4 0x31c4803b in unsigned long std::__1::__function::__policy_invoker<unsigned long (unsigned long)>::__call_impl<std::__1::__function::__default_alloc_func<DB::GetPriorityForLoadBalancing::getPriorityFunc(DB::LoadBalancing, unsigned long, unsigned long) const::$_3, unsigned long (unsigned long)>>(std::__1::__function::__policy_storage const*, unsigned long) build_docker/../contrib/libcxx/include/__functional/function.h:711:16
#5 0x31c38b07 in std::__1::__function::__policy_func<unsigned long (unsigned long)>::operator()(unsigned long&&) const build_docker/../contrib/libcxx/include/__functional/function.h:843:16
ClickHouse#6 0x31c38b07 in std::__1::function<unsigned long (unsigned long)>::operator()(unsigned long) const build_docker/../contrib/libcxx/include/__functional/function.h:1184:12
ClickHouse#7 0x31c38b07 in PoolWithFailoverBase<DB::IConnectionPool>::getShuffledPools(unsigned long, std::__1::function<unsigned long (unsigned long)> const&) build_docker/../src/Common/PoolWithFailoverBase.h:174:39
This frame has 2 object(s):
[32, 40) 'pool_size.addr' <== Memory access at offset 32 is inside this variable
[64, 88) 'ref.tmp' (line 18)
```
</details>
[1]: https://s3.amazonaws.com/clickhouse-test-reports/41046/adea92f847373d1fcfd733d8979c63024f9b80bf/integration_tests__asan__[1/3].html
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
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Sep 27, 2022
…s and parallel KILL
Right now it is possible to call QueryStatus::addPipelineExecutor() when
the executors_mutex already acquired, it is possible when the query was
cancelled via KILL QUERY.
Here I will show some traces from debugger from a real example, where
tons of ProcessList::insert() got deadlocked.
Let's look at the lock owner for one of the threads that was deadlocked
in ProcessList::insert():
(gdb) p *mutex
$2 = {
__data = {
__owner = 46899,
},
}
And now let's see the stack trace of the 46899:
#0 __lll_lock_wait () at ../sysdeps/unix/sysv/linux/x86_64/lowlevellock.S:103
#1 0x00007fb65569b714 in __GI___pthread_mutex_lock (mutex=0x7fb4a9d15298) at ../nptl/pthread_mutex_lock.c:80
#2 0x000000001b6edd91 in pthread_mutex_lock (arg=0x7fb4a9d15298) at ../src/Common/ThreadFuzzer.cpp:317
#3 std::__1::__libcpp_mutex_lock (__m=0x7fb4a9d15298) at ../contrib/libcxx/include/__threading_support:303
#4 std::__1::mutex::lock (this=0x7fb4a9d15298) at ../contrib/libcxx/src/mutex.cpp:33
#5 0x0000000014c7ae63 in std::__1::lock_guard<std::__1::mutex>::lock_guard (__m=..., this=<optimized out>) at ../contrib/libcxx/include/__mutex_base:91
ClickHouse#6 DB::QueryStatus::addPipelineExecutor (this=0x7fb4a9d14f90, e=0x80) at ../src/Interpreters/ProcessList.cpp:372
ClickHouse#7 0x0000000015bee4a7 in DB::PipelineExecutor::PipelineExecutor (this=0x7fb4b1e53618, processors=..., elem=<optimized out>) at ../src/Processors/Executors/PipelineExecutor.cpp:54
ClickHouse#12 std::__1::make_shared<DB::PipelineExecutor, std::__1::vector<std::__1::shared_ptr<DB::IProcessor>, std::__1::allocator<std::__1::shared_ptr<DB::IProcessor> > >&, DB::QueryStatus*&, void> (__args=@0x7fb63095b9b0: 0x7fb4a9d14f90, __args=@0x7fb63095b9b0: 0x7fb4a9d14f90) at ../contrib/libcxx/include/__memory/shared_ptr.h:963
ClickHouse#13 DB::QueryPipelineBuilder::execute (this=0x7fb63095b8b0) at ../src/QueryPipeline/QueryPipelineBuilder.cpp:552
ClickHouse#14 0x00000000158c6c27 in DB::Connection::sendExternalTablesData (this=0x7fb6545e9d98, data=...) at ../src/Client/Connection.cpp:797
ClickHouse#27 0x0000000014043a81 in DB::RemoteQueryExecutorRoutine::operator() (this=0x7fb63095bf20, sink=...) at ../src/QueryPipeline/RemoteQueryExecutorReadContext.cpp:46
ClickHouse#32 0x000000000a16dd4f in make_fcontext () at ../contrib/boost/libs/context/src/asm/make_x86_64_sysv_elf_gas.S:71
And also in the logs you can see very strange things for this thread:
2022.09.13 14:14:51.228979 [ 51145 ] {1712D4E914EC7C99} <Debug> Connection (localhost:9000): Sent data for 1 external tables, total 11 rows in 0.00046389 sec., 23688 rows/sec., 3.84 KiB (8.07 MiB/sec.), compressed 1.1070121092649958 times to 3.47 KiB (7.29 MiB/sec.)
...
2022.09.13 14:14:51.719402 [ 46899 ] {7c90ffa4-1dc8-42fd-938c-4e307c244394} <Debug> executeQuery: (from 10.101.15.181:42478) KILL QUERY WHERE query_id = '1712D4E914EC7C99' (stage: Complete)
2022.09.13 14:14:51.719488 [ 46899 ] {7c90ffa4-1dc8-42fd-938c-4e307c244394} <Debug> executeQuery: (internal) SELECT query_id, user, query FROM system.processes WHERE query_id = '1712D4E914EC7C99' (stage: Complete)
2022.09.13 14:14:51.719754 [ 46899 ] {7c90ffa4-1dc8-42fd-938c-4e307c244394} <Trace> ContextAccess (default): Access granted: SELECT(user, query_id, query) ON system.processes
2022.09.13 14:14:51.720544 [ 46899 ] {7c90ffa4-1dc8-42fd-938c-4e307c244394} <Trace> InterpreterSelectQuery: FetchColumns -> Complete
2022.09.13 14:14:53.228964 [ 46899 ] {7c90ffa4-1dc8-42fd-938c-4e307c244394} <Debug> Connection (localhost:9000): Sent data for 2 scalars, total 2 rows in 2.6838e-05 sec., 73461 rows/sec., 68.00 B (2.38 MiB/sec.), compressed 0.4594594594594595 times to 148.00 B (5.16 MiB/sec.)
How is this possible? The answer is fibers and query cancellation
routine. During cancellation of async queries it going into fibers again
and try to do this gracefully. However because of this during canceling
query it may call QueryStatus::addPipelineExecutor() from
QueryStatus::cancelQuery().
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
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Oct 26, 2022
…verflow
UBSAN report:
$ UBSAN_SYMBOLIZER_PATH=/usr/bin/llvm-symbolizer-14 UBSAN_OPTIONS=print_stacktrace=1 ./unit_tests_dbms --gtest_filter=*Gorilla*
../src/Compression/tests/gtest_compressionCodec.cpp:1216:47: runtime error: signed integer overflow: 23 * 100000000 cannot be represented in type 'int'
#0 0x14f67fd1 in auto (anonymous namespace)::$_6::operator()(int) const::'lambda'(auto)::operator()<int>(auto) const build_docker/../src/Compression/tests/gtest_compressionCodec.cpp:1216:47
#1 0x14f67fd1 in (anonymous namespace)::CodecTestSequence (anonymous namespace)::generateSeq<long, (anonymous namespace)::$_6::operator()(int) const::'lambda'(auto), int, int>((anonymous namespace)::$_6::operator()(int) const::'lambda'(auto), char const*, int, int) build_docker/../src/Compression/tests/gtest_compressionCodec.cpp:394:36
#2 0x14f67fd1 in auto (anonymous namespace)::GCompatibilityTestSequence<long>() build_docker/../src/Compression/tests/gtest_compressionCodec.cpp:1224:12
#3 0x14f3c7f3 in (anonymous namespace)::gtest_GorillaCodecTestCompatibility_EvalGenerator_() build_docker/../src/Compression/tests/gtest_compressionCodec.cpp:1227:1
#4 0x14f6bdb5 in testing::internal::ParameterizedTestSuiteInfo<(anonymous namespace)::CodecTestCompatibility>::RegisterTests() build_docker/../contrib/googletest/googletest/include/gtest/internal/gtest-param-util.h:553:45
#5 0x27d87988 in testing::internal::ParameterizedTestSuiteRegistry::RegisterTests() build_docker/../contrib/googletest/googletest/include/gtest/internal/gtest-param-util.h:726:24
ClickHouse#6 0x27d87988 in testing::internal::UnitTestImpl::RegisterParameterizedTests() build_docker/../contrib/googletest/googletest/src/gtest.cc:2805:34
ClickHouse#7 0x27d87988 in testing::internal::UnitTestImpl::PostFlagParsingInit() build_docker/../contrib/googletest/googletest/src/gtest.cc:5492:5
ClickHouse#8 0x27d9d002 in void testing::internal::InitGoogleTestImpl<char>(int*, char**) build_docker/../contrib/googletest/googletest/src/gtest.cc:6499:22
ClickHouse#9 0x14fd5495 in main build_docker/../src/Coordination/tests/gtest_coordination.cpp:2189:5
ClickHouse#10 0x7f8c29005209 (/lib/x86_64-linux-gnu/libc.so.6+0x29209) (BuildId: 71a7c7b97bc0b3e349a3d8640252655552082bf5)
ClickHouse#11 0x7f8c290052bb in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x292bb) (BuildId: 71a7c7b97bc0b3e349a3d8640252655552082bf5)
ClickHouse#12 0x14ce356d in _start (/work1/azat/tmp/42190/unit_tests_dbms+0x14ce356d) (BuildId: 482550e3f8d45f06e8c7f8147f427ee798c1f645)
SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior ../src/Compression/tests/gtest_compressionCodec.cpp:1216:47 in
Signed-off-by: Azat Khuzhin <[email protected]>
nikitamikhaylov
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Dec 2, 2022
Parallel grace hash join
nikitamikhaylov
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Dec 2, 2022
…reated
ASAN report:
Code: 586. DB::ErrnoException: Cannot create file: /src/.clickhouse_history, errno: 2, strerror: No such file or directory. (CANNOT_CREATE_FILE)
=================================================================
==1==ERROR: AddressSanitizer: heap-use-after-free on address 0x6240000208f0 at pc 0x000030d22ade bp 0x7ffff2ff3f70 sp 0x7ffff2ff3f68
READ of size 8 at 0x6240000208f0 thread T2
#0 0x30d22add in DB::ProcessList::insert() build_docker/../src/Interpreters/ProcessList.cpp:89:36
#1 0x31411018 in DB::executeQueryImpl() build_docker/../src/Interpreters/executeQuery.cpp:516:60
#2 0x3140e1ab in DB::executeQuery() build_docker/../src/Interpreters/executeQuery.cpp:1083:30
#3 0x3364391e in DB::LocalConnection::sendQuery() build_docker/../src/Client/LocalConnection.cpp:119:21
#4 0x3367bab0 in DB::Suggest::fetch() build_docker/../src/Client/Suggest.cpp:141:16
#5 0x336820eb in void DB::Suggest::load<DB::LocalConnection>()::'lambda'()::operator()() const build_docker/../src/Client/Suggest.cpp:118:17
0x6240000208f0 is located 2032 bytes inside of 7056-byte region [0x624000020100,0x624000021c90)
freed by thread T0 here:
#0 0xe381ef2 in operator delete(void*, unsigned long) (/wrk/clickhouse-asan+0xe381ef2) (BuildId: 6ea6d1a5d2d5a164f60f0fd8230936305bc8d9d0)
#1 0x335509fe in DB::ClientBase::~ClientBase() build_docker/../src/Client/ClientBase.cpp:293:25
#2 0x1f809bd5 in mainEntryClickHouseLocal(int, char**) build_docker/../programs/local/LocalServer.cpp:804:5
#3 0xe3856ad in main build_docker/../programs/main.cpp:482:12
#4 0x7ffff7dc0082 in __libc_start_main /build/glibc-SzIz7B/glibc-2.31/csu/../csu/libc-start.c:308:16
previously allocated by thread T0 here:
#0 0xe38128d in operator new(unsigned long) (/wrk/clickhouse-asan+0xe38128d) (BuildId: 6ea6d1a5d2d5a164f60f0fd8230936305bc8d9d0)
#1 0x2f34a7f3 in std::__1::__unique_if<DB::ContextSharedPart>::__unique_single std::__1::make_unique[abi:v15003]<DB::ContextSharedPart>() build_docker/../contrib/libcxx/include/__memory/unique_ptr.h:714:28
#2 0x2f34a7f3 in DB::Context::createShared() build_docker/../src/Interpreters/Context.cpp:603:32
#3 0x1f7f901d in DB::LocalServer::processConfig() build_docker/../programs/local/LocalServer.cpp:535:22
#4 0x1f7f4d92 in DB::LocalServer::main() build_docker/../programs/local/LocalServer.cpp:419:5
#5 0x3af24ffe in Poco::Util::Application::run() build_docker/../contrib/poco/Util/src/Application.cpp:334:8
ClickHouse#6 0x1f809bca in mainEntryClickHouseLocal(int, char**) build_docker/../programs/local/LocalServer.cpp:803:20
ClickHouse#7 0xe3856ad in main build_docker/../programs/main.cpp:482:12
ClickHouse#8 0x7ffff7dc0082 in __libc_start_main /build/glibc-SzIz7B/glibc-2.31/csu/../csu/libc-start.c:308:16
Thread T2 created by T0 here:
#0 0xe32fedc in pthread_create (/wrk/clickhouse-asan+0xe32fedc) (BuildId: 6ea6d1a5d2d5a164f60f0fd8230936305bc8d9d0)
#1 0x336806df in std::__1::__libcpp_thread_create[abi:v15003](unsigned long*, void* (*)(void*), void*) build_docker/../contrib/libcxx/include/__threading_support:376:10
#2 0x336806df in std::__1::thread::thread<void DB::Suggest::load<DB::LocalConnection>()::'lambda'(), void>() build_docker/../contrib/libcxx/include/thread:311:16
#3 0x3367ff5b in void DB::Suggest::load<DB::LocalConnection>(std::__1::shared_ptr<DB::Context const>, DB::ConnectionParameters const&, int) build_docker/../src/Client/Suggest.cpp:110:22
#4 0x3357fee9 in DB::ClientBase::runInteractive() build_docker/../src/Client/ClientBase.cpp:2066:22
#5 0x1f7f5264 in DB::LocalServer::main() build_docker/../programs/local/LocalServer.cpp
ClickHouse#6 0x3af24ffe in Poco::Util::Application::run() build_docker/../contrib/poco/Util/src/Application.cpp:334:8
ClickHouse#7 0x1f809bca in mainEntryClickHouseLocal(int, char**) build_docker/../programs/local/LocalServer.cpp:803:20
ClickHouse#8 0xe3856ad in main build_docker/../programs/main.cpp:482:12
ClickHouse#9 0x7ffff7dc0082 in __libc_start_main /build/glibc-SzIz7B/glibc-2.31/csu/../csu/libc-start.c:308:16
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
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Jan 25, 2023
…ceptors)
Recently I noticed that clickhouse compiled with ASan does not work with
newer glibc 2.36+, before I though that this was only about compiling
with old but using new, however that was not correct, ASan simply does
not work with glibc 2.36+.
Here is a simple reproducer [1]:
$ cat > test-asan.cpp <<EOL
#include <pthread.h>
int main()
{
// something broken in ASan in interceptor for __pthread_mutex_lock
// and only since glibc 2.36, and for pthread_mutex_lock everything is OK
pthread_mutex_t mutex = PTHREAD_MUTEX_INITIALIZER;
return __pthread_mutex_lock(&mutex);
}
EOL
$ clang -g3 -o test-asan test-asan.cpp -fsanitize=address
$ ./test-asan
AddressSanitizer:DEADLYSIGNAL
=================================================================
==15659==ERROR: AddressSanitizer: SEGV on unknown address 0x000000000000 (pc 0x000000000000 bp 0x7fffffffccb0 sp 0x7fffffffcb98 T0)
==15659==Hint: pc points to the zero page.
==15659==The signal is caused by a READ memory access.
==15659==Hint: address points to the zero page.
#0 0x0 (<unknown module>)
#1 0x7ffff7cda28f (/usr/lib/libc.so.6+0x2328f) (BuildId: 1e94beb079e278ac4f2c8bce1f53091548ea1584)
AddressSanitizer can not provide additional info.
SUMMARY: AddressSanitizer: SEGV (<unknown module>)
==15659==ABORTING
[1]: https://gist.github.com/azat/af073e57a248e04488b21068643f079e
I've started observing glibc code, there was some changes in glibc, that
moves pthread functions out from libpthread.so.0 into libc.so.6
(somewhere between 2.31 and 2.35), but
the problem pops up only with 2.36, 2.35 works fine.
After this I've looked into changes between 2.35 and 2.36, and found
this patch [2] - "dlsym: Make RTLD_NEXT prefer default version
definition [BZ ClickHouse#14932]", that fixes this bug [3].
[2]: https://sourceware.org/git/?p=glibc.git;a=commit;h=efa7936e4c91b1c260d03614bb26858fbb8a0204
[3]: https://sourceware.org/bugzilla/show_bug.cgi?id=14932
The problem with using DL_LOOKUP_RETURN_NEWEST flag for RTLD_NEXT is
that it does not resolve hidden symbols (and __pthread_mutex_lock is
indeed hidden).
Here is a sample that will show the difference [4]:
$ cat > test-dlsym.c <<EOL
#define _GNU_SOURCE
#include <dlfcn.h>
#include <stdio.h>
int main()
{
void *p = dlsym(RTLD_NEXT, "__pthread_mutex_lock");
printf("__pthread_mutex_lock: %p (via RTLD_NEXT)\n", p);
return 0;
}
EOL
# glibc 2.35: __pthread_mutex_lock: 0x7ffff7e27f70 (via RTLD_NEXT)
# glibc 2.36: __pthread_mutex_lock: (nil) (via RTLD_NEXT)
[4]: https://gist.github.com/azat/3b5f2ae6011bef2ae86392cea7789eb7
But ThreadFuzzer uses internal symbols to wrap
pthread_mutex_lock/pthread_mutex_unlock, which are intercepted by ASan
and this leads to NULL dereference.
The fix was obvious - just use dlsym(RTLD_NEXT), however on older
glibc's this leads to endless recursion (see commits in the code). But
only for jemalloc [5], and even though sanitizers does not uses jemalloc
the code of ThreadFuzzer is generic and I don't want to guard it with
more preprocessors macros.
[5]: https://gist.github.com/azat/588d9c72c1e70fc13ebe113197883aa2
So we have to use RTLD_NEXT only for ASan.
There is also one more interesting issue, if you will compile with clang
that itself had been compiled with newer libc (i.e. 2.36), you will get
the following error:
$ podman run --privileged -v $PWD/.cmake-asan/programs:/root/bin -e PATH=/bin:/root/bin -e --rm -it ubuntu-dev-v3 clickhouse
==1==ERROR: AddressSanitizer failed to allocate 0x0 (0) bytes of SetAlternateSignalStack (error code: 22)
...
==1==End of process memory map.
AddressSanitizer: CHECK failed: sanitizer_common.cpp:53 "((0 && "unable to mmap")) != (0)" (0x0, 0x0) (tid=1)
<empty stack>
The problem is that since GLIBC_2.31, `SIGSTKSZ` is a call to
`getconf(_SC_MINSIGSTKSZ)`, but older glibc does not have it, so `-1`
will be returned and used as `SIGSTKSZ` instead.
The workaround to disable alternative stack:
$ podman run --privileged -v $PWD/.cmake-asan/programs:/root/bin -e PATH=/bin:/root/bin -e ASAN_OPTIONS=use_sigaltstack=0 --rm -it ubuntu-dev-v3 clickhouse client --version
ClickHouse client version 22.13.1.1.
Fixes: ClickHouse#43426
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
pushed a commit
that referenced
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May 14, 2023
Reordering of the static variables should be enough to fix this:
[ RUN ] IOResourceStaticResourceManager.Prioritization
=================================================================
==13==ERROR: AddressSanitizer: stack-use-after-scope on address 0x7f7d8d621970 at pc 0x5636b80dcbb2 bp 0x7f7c48e47dd0 sp 0x7f7c48e47dc8
READ of size 8 at 0x7f7d8d621970 thread T3975 (ThreadPool)
#0 0x5636b80dcbb1 in IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_1::operator()(long) const build_docker/./src/IO/Resource/tests/gtest_resource_manager_static.cpp:78:13
#1 0x5636b80dcbb1 in IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0::operator()() const build_docker/./src/IO/Resource/tests/gtest_resource_manager_static.cpp:95:21
#2 0x5636b80dcbb1 in decltype(std::declval<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&>()()) std::__1::__invoke[abi:v15000]<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:394:23
#3 0x5636b80dcbb1 in decltype(auto) std::__1::__apply_tuple_impl[abi:v15000]<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&, std::__1::tuple<>&>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&, std::__1::tuple<>&, std::__1::__tuple_indices<>) build_docker/./contrib/llvm-project/libcxx/include/tuple:1789:1
#4 0x5636b80dcbb1 in decltype(auto) std::__1::apply[abi:v15000]<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&, std::__1::tuple<>&>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&, std::__1::tuple<>&) build_docker/./contrib/llvm-project/libcxx/include/tuple:1798:1
#5 0x5636b80dcbb1 in ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'()::operator()() build_docker/./src/Common/ThreadPool.h:228:13
ClickHouse#6 0x5636b80dcbb1 in decltype(std::declval<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>()()) std::__1::__invoke[abi:v15000]<ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'()&>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:394:23
ClickHouse#7 0x5636b80dcbb1 in void std::__1::__invoke_void_return_wrapper<void, true>::__call<ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'()&>(ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'()&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:479:9
ClickHouse#8 0x5636b80dcbb1 in std::__1::__function::__default_alloc_func<ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'(), void ()>::operator()[abi:v15000]() build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:235:12
ClickHouse#9 0x5636b80dcbb1 in void std::__1::__function::__policy_invoker<void ()>::__call_impl<std::__1::__function::__default_alloc_func<ThreadFromGlobalPoolImpl<true>::ThreadFromGlobalPoolImpl<IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0>(IOResourceStaticResourceManager_Prioritization_Test::TestBody()::$_0&&)::'lambda'(), void ()>>(std::__1::__function::__policy_storage const*) build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:716:16
ClickHouse#10 0x5636ea219310 in std::__1::__function::__policy_func<void ()>::operator()[abi:v15000]() const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:848:16
ClickHouse#11 0x5636ea219310 in std::__1::function<void ()>::operator()() const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:1187:12
ClickHouse#12 0x5636ea219310 in ThreadPoolImpl<std::__1::thread>::worker(std::__1::__list_iterator<std::__1::thread, void*>) build_docker/./src/Common/ThreadPool.cpp:416:13
ClickHouse#13 0x5636ea2258ac in void ThreadPoolImpl<std::__1::thread>::scheduleImpl<void>(std::__1::function<void ()>, long, std::__1::optional<unsigned long>, bool)::'lambda0'()::operator()() const build_docker/./src/Common/ThreadPool.cpp:180:73
ClickHouse#14 0x5636ea2258ac in decltype(std::declval<void>()()) std::__1::__invoke[abi:v15000]<void ThreadPoolImpl<std::__1::thread>::scheduleImpl<void>(std::__1::function<void ()>, long, std::__1::optional<unsigned long>, bool)::'lambda0'()>(void&&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:394:23
ClickHouse#15 0x5636ea2258ac in void std::__1::__thread_execute[abi:v15000]<std::__1::unique_ptr<std::__1::__thread_struct, std::__1::default_delete<std::__1::__thread_struct>>, void ThreadPoolImpl<std::__1::thread>::scheduleImpl<void>(std::__1::function<void ()>, long, std::__1::optional<unsigned long>, bool)::'lambda0'()>(std::__1::tuple<void, void ThreadPoolImpl<std::__1::thread>::scheduleImpl<void>(std::__1::function<void ()>, long, std::__1::optional<unsigned long>, bool)::'lambda0'()>&, std::__1::__tuple_indices<>) build_docker/./contrib/llvm-project/libcxx/include/thread:284:5
ClickHouse#16 0x5636ea2258ac in void* std::__1::__thread_proxy[abi:v15000]<std::__1::tuple<std::__1::unique_ptr<std::__1::__thread_struct, std::__1::default_delete<std::__1::__thread_struct>>, void ThreadPoolImpl<std::__1::thread>::scheduleImpl<void>(std::__1::function<void ()>, long, std::__1::optional<unsigned long>, bool)::'lambda0'()>>(void*) build_docker/./contrib/llvm-project/libcxx/include/thread:295:5
ClickHouse#17 0x7f7d8fcf1608 in start_thread (/lib/x86_64-linux-gnu/libpthread.so.0+0x8608) (BuildId: 7b4536f41cdaa5888408e82d0836e33dcf436466)
ClickHouse#18 0x7f7d8fc16132 in __clone (/lib/x86_64-linux-gnu/libc.so.6+0x11f132) (BuildId: 1878e6b475720c7c51969e69ab2d276fae6d1dee)
Address 0x7f7d8d621970 is located in stack of thread T0 at offset 368 in frame
#0 0x5636b80d9bef in IOResourceStaticResourceManager_Prioritization_Test::TestBody() build_docker/./src/IO/Resource/tests/gtest_resource_manager_static.cpp:46
This frame has 10 object(s):
[32, 36) 'requests_per_thead' (line 48)
[48, 208) 't' (line 49)
[272, 296) 'ref.tmp' (line 51)
[336, 352) 'last_priority' (line 74)
[368, 376) 'check' (line 75) <== Memory access at offset 368 is inside this variable
[400, 424) 'name' (line 83)
[464, 512) 'ref.tmp13' (line 87)
[544, 560) 'c' (line 101)
[576, 600) 'ref.tmp32' (line 101)
[640, 664) 'ref.tmp41' (line 102)
Signed-off-by: Azat Khuzhin <[email protected]>
vitlibar
pushed a commit
that referenced
this pull request
Jun 12, 2023
Fixed convertFieldToType case of converting Date and Date32 to DateTime64 Field
vitlibar
pushed a commit
that referenced
this pull request
Jun 23, 2023
Hackish way of setting up timezone on the client
vitlibar
pushed a commit
that referenced
this pull request
Apr 20, 2024
Fixes integration test_reload_certificate/test.py::test_first_than_second_cert --- E Exception: Sanitizer assert found for instance ================== E WARNING: ThreadSanitizer: data race (pid=1) E Write of size 8 at 0x7b2800025d30 by thread T2 (mutexes: write M0, write M1): E #0 free <null> (clickhouse+0x709a3e5) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #1 CRYPTO_free build_docker/./contrib/openssl/crypto/mem.c:282:5 (clickhouse+0x2015f8ea) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #2 EVP_PKEY_free build_docker/./contrib/openssl/crypto/evp/p_lib.c:1809:5 (clickhouse+0x2012a751) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #3 Poco::Crypto::EVPPKey::~EVPPKey() build_docker/./base/poco/Crypto/src/EVPPKey.cpp:121:17 (clickhouse+0x1d00ffa9) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #4 DB::CertificateReloader::Data::~Data() build_docker/./src/Server/CertificateReloader.h:71:12 (clickhouse+0x194fb42d) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #5 std::__1::default_delete<DB::CertificateReloader::Data const>::operator()[abi:v15000](DB::CertificateReloader::Data const*) const build_docker/./contrib/llvm-project/libcxx/include/__memory/unique_ptr.h:48:5 (clickhouse+0x194fb42d) E ClickHouse#6 std::__1::__shared_ptr_pointer<DB::CertificateReloader::Data const*, std::__1::default_delete<DB::CertificateReloader::Data const>, std::__1::allocator<DB::CertificateReloader::Data const>>::__on_zero_shared() build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:263:5 (clickhouse+0x194fb42d) E ClickHouse#7 std::__1::__shared_count::__release_shared[abi:v15000]() build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:174:9 (clickhouse+0x194fade0) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#8 std::__1::__shared_weak_count::__release_shared[abi:v15000]() build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:215:27 (clickhouse+0x194fade0) E ClickHouse#9 std::__1::shared_ptr<DB::CertificateReloader::Data const>::~shared_ptr[abi:v15000]() build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:702:23 (clickhouse+0x194fade0) E ClickHouse#10 std::__1::shared_ptr<DB::CertificateReloader::Data const>::operator=[abi:v15000](std::__1::shared_ptr<DB::CertificateReloader::Data const>&&) build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:723:9 (clickhouse+0x194fade0) E ClickHouse#11 MultiVersion<DB::CertificateReloader::Data>::set(std::__1::unique_ptr<DB::CertificateReloader::Data const, std::__1::default_delete<DB::CertificateReloader::Data const>>&&) build_docker/./src/Common/MultiVersion.h:76:25 (clickhouse+0x194fade0) E ClickHouse#12 DB::CertificateReloader::tryLoad(Poco::Util::AbstractConfiguration const&) build_docker/./src/Server/CertificateReloader.cpp:83:18 (clickhouse+0x194f94ca) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#13 DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6::operator()(Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool) const build_docker/./programs/server/Server.cpp:1546:45 (clickhouse+0xf384df7) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#14 decltype(std::declval<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6&>()(std::declval<Poco::AutoPtr<Poco::Util::AbstractConfiguration>>(), std::declval<bool>())) std::__1::__invoke[abi:v15000]<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6&, Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool>(DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6&, Poco::AutoPtr<Poco::Util::AbstractConfiguration>&&, bool&&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:394:23 (clickhouse+0xf3827a9) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#15 void std::__1::__invoke_void_return_wrapper<void, true>::__call<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6&, Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool>(DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6&, Poco::AutoPtr<Poco::Util::AbstractConfiguration>&&, bool&&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:479:9 (clickhouse+0xf3827a9) E ClickHouse#16 std::__1::__function::__default_alloc_func<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6, void (Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool)>::operator()[abi:v15000](Poco::AutoPtr<Poco::Util::AbstractConfiguration>&&, bool&&) build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:235:12 (clickhouse+0xf3827a9) E ClickHouse#17 void std::__1::__function::__policy_invoker<void (Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool)>::__call_impl<std::__1::__function::__default_alloc_func<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_6, void (Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool)>>(std::__1::__function::__policy_storage const*, Poco::AutoPtr<Poco::Util::AbstractConfiguration>&&, bool) build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:716:16 (clickhouse+0xf3827a9) E ClickHouse#18 std::__1::__function::__policy_func<void (Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool)>::operator()[abi:v15000](Poco::AutoPtr<Poco::Util::AbstractConfiguration>&&, bool&&) const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:848:16 (clickhouse+0x19fd2cbe) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#19 std::__1::function<void (Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool)>::operator()(Poco::AutoPtr<Poco::Util::AbstractConfiguration>, bool) const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:1187:12 (clickhouse+0x19fd2cbe) E ClickHouse#20 DB::ConfigReloader::reloadIfNewer(bool, bool, bool, bool) build_docker/./src/Common/Config/ConfigReloader.cpp:150:13 (clickhouse+0x19fd2cbe) E ClickHouse#21 DB::ConfigReloader::reload() build_docker/./src/Common/Config/ConfigReloader.h:51:21 (clickhouse+0xf38767c) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#22 DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13::operator()() const build_docker/./programs/server/Server.cpp:1731:31 (clickhouse+0xf38767c) E ClickHouse#23 decltype(std::declval<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13&>()()) std::__1::__invoke[abi:v15000]<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13&>(DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:394:23 (clickhouse+0xf38767c) E ClickHouse#24 void std::__1::__invoke_void_return_wrapper<void, true>::__call<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13&>(DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13&) build_docker/./contrib/llvm-project/libcxx/include/__functional/invoke.h:479:9 (clickhouse+0xf38767c) E ClickHouse#25 std::__1::__function::__default_alloc_func<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13, void ()>::operator()[abi:v15000]() build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:235:12 (clickhouse+0xf38767c) E ClickHouse#26 void std::__1::__function::__policy_invoker<void ()>::__call_impl<std::__1::__function::__default_alloc_func<DB::Server::main(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>> const&)::$_13, void ()>>(std::__1::__function::__policy_storage const*) build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:716:16 (clickhouse+0xf38767c) E ClickHouse#27 std::__1::__function::__policy_func<void ()>::operator()[abi:v15000]() const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:848:16 (clickhouse+0x16907aa0) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#28 std::__1::function<void ()>::operator()() const build_docker/./contrib/llvm-project/libcxx/include/__functional/function.h:1187:12 (clickhouse+0x16907aa0) E ClickHouse#29 DB::Context::reloadConfig() const build_docker/./src/Interpreters/Context.cpp:4357:5 (clickhouse+0x16907aa0) E ClickHouse#30 DB::InterpreterSystemQuery::execute() build_docker/./src/Interpreters/InterpreterSystemQuery.cpp:577:29 (clickhouse+0x17e78c19) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#31 DB::executeQueryImpl(char const*, char const*, std::__1::shared_ptr<DB::Context>, DB::QueryFlags, DB::QueryProcessingStage::Enum, DB::ReadBuffer*) build_docker/./src/Interpreters/executeQuery.cpp:1195:40 (clickhouse+0x17e3e462) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#32 DB::executeQuery(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&, std::__1::shared_ptr<DB::Context>, DB::QueryFlags, DB::QueryProcessingStage::Enum) build_docker/./src/Interpreters/executeQuery.cpp:1374:26 (clickhouse+0x17e39837) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#33 DB::TCPHandler::runImpl() build_docker/./src/Server/TCPHandler.cpp:518:54 (clickhouse+0x195cc651) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#34 DB::TCPHandler::run() build_docker/./src/Server/TCPHandler.cpp:2329:9 (clickhouse+0x195e8707) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#35 Poco::Net::TCPServerConnection::start() build_docker/./base/poco/Net/src/TCPServerConnection.cpp:43:3 (clickhouse+0x1d00d942) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#36 Poco::Net::TCPServerDispatcher::run() build_docker/./base/poco/Net/src/TCPServerDispatcher.cpp:115:20 (clickhouse+0x1d00e1b1) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#37 Poco::PooledThread::run() build_docker/./base/poco/Foundation/src/ThreadPool.cpp:188:14 (clickhouse+0x1d20f2e6) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#38 Poco::(anonymous namespace)::RunnableHolder::run() build_docker/./base/poco/Foundation/src/Thread.cpp:45:11 (clickhouse+0x1d20d5af) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#39 Poco::ThreadImpl::runnableEntry(void*) build_docker/./base/poco/Foundation/src/Thread_POSIX.cpp:335:27 (clickhouse+0x1d20ba69) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E E Previous atomic write of size 4 at 0x7b2800025d30 by thread T3 (mutexes: write M2): E #0 CRYPTO_DOWN_REF build_docker/./contrib/openssl/include/internal/refcount.h:51:12 (clickhouse+0x2012a6e6) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #1 EVP_PKEY_free build_docker/./contrib/openssl/crypto/evp/p_lib.c:1795:5 (clickhouse+0x2012a6e6) E #2 ssl_cert_clear_certs build_docker/./contrib/openssl/ssl/ssl_cert.c:246:9 (clickhouse+0x1ffafd37) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #3 ssl_cert_free build_docker/./contrib/openssl/ssl/ssl_cert.c:277:5 (clickhouse+0x1ffafd37) E #4 ossl_ssl_connection_free build_docker/./contrib/openssl/ssl/ssl_lib.c:1458:5 (clickhouse+0x1ffba6af) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E #5 SSL_free build_docker/./contrib/openssl/ssl/ssl_lib.c:1417:9 (clickhouse+0x1ffb920e) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#6 Poco::Net::SecureSocketImpl::reset() build_docker/./base/poco/NetSSL_OpenSSL/src/SecureSocketImpl.cpp:583:3 (clickhouse+0x1cfaac60) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#7 Poco::Net::SecureSocketImpl::~SecureSocketImpl() build_docker/./base/poco/NetSSL_OpenSSL/src/SecureSocketImpl.cpp:80:3 (clickhouse+0x1cfaac60) E ClickHouse#8 Poco::Net::SecureStreamSocketImpl::~SecureStreamSocketImpl() build_docker/./base/poco/NetSSL_OpenSSL/src/SecureStreamSocketImpl.cpp:52:1 (clickhouse+0x1cfb15dd) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#9 Poco::Net::SecureStreamSocketImpl::~SecureStreamSocketImpl() build_docker/./base/poco/NetSSL_OpenSSL/src/SecureStreamSocketImpl.cpp:43:1 (clickhouse+0x1cfb15dd) E ClickHouse#10 Poco::RefCountedObject::release() const build_docker/./base/poco/Foundation/include/Poco/RefCountedObject.h:86:13 (clickhouse+0x1cffc81e) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#11 Poco::Net::Socket::~Socket() build_docker/./base/poco/Net/src/Socket.cpp:68:10 (clickhouse+0x1cffc81e) E ClickHouse#12 Poco::Net::StreamSocket::~StreamSocket() build_docker/./base/poco/Net/src/StreamSocket.cpp:63:1 (clickhouse+0x1d009c39) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#13 Poco::Net::TCPConnectionNotification::~TCPConnectionNotification() build_docker/./base/poco/Net/src/TCPServerDispatcher.cpp:43:2 (clickhouse+0x1d00ef50) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#14 Poco::Net::TCPConnectionNotification::~TCPConnectionNotification() build_docker/./base/poco/Net/src/TCPServerDispatcher.cpp:42:2 (clickhouse+0x1d00ef50) E ClickHouse#15 Poco::RefCountedObject::release() const build_docker/./base/poco/Foundation/include/Poco/RefCountedObject.h:86:13 (clickhouse+0x1d00e203) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#16 Poco::AutoPtr<Poco::Notification>::~AutoPtr() build_docker/./base/poco/Foundation/include/Poco/AutoPtr.h:91:19 (clickhouse+0x1d00e203) E ClickHouse#17 Poco::Net::TCPServerDispatcher::run() build_docker/./base/poco/Net/src/TCPServerDispatcher.cpp:122:3 (clickhouse+0x1d00e203) E ClickHouse#18 Poco::PooledThread::run() build_docker/./base/poco/Foundation/src/ThreadPool.cpp:188:14 (clickhouse+0x1d20f2e6) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#19 Poco::(anonymous namespace)::RunnableHolder::run() build_docker/./base/poco/Foundation/src/Thread.cpp:45:11 (clickhouse+0x1d20d5af) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E ClickHouse#20 Poco::ThreadImpl::runnableEntry(void*) build_docker/./base/poco/Foundation/src/Thread_POSIX.cpp:335:27 (clickhouse+0x1d20ba69) (BuildId: 706d92b17db171493f293d517643f726ee1b7b1e) E
vitlibar
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Apr 20, 2024
This commit adresses below leaksan find. I tried to reproduce this locally but 02802_clickhouse_disks_s3_copy.sh but couldn't. clickhouse-disks did not do anything useful (it would not even print logging), neither with a standard build nor with a leaksan build. Could not find further documentation of it or even what this tool is supposed to do, perhaps it is just for internal use. Also, - line numbers in the leaksan report were partially missing, - I am not really sure how Sha256HMACOpenSSLImpl::Calculate is calling into hmac_init (there must be some sort of static initialization somewhere but I did not find it), and - my fix is in a weird place due to other restrictions (see the commit in the aws-sdk-cpp contrib repo). The chance that this fix fixes the leak are low. If it doesn't work, add "# Tag no-asan" + a comment to 02802_clickhouse_disks_s3_copy.sh and don't worry further. EDIT: The commit fixes the issue, everything is good. https://s3.amazonaws.com/clickhouse-test-reports/59870/b452e3d1ab87b8cc5810693aeea28f69ad28d671/stateless_tests__asan__[3_4].html 2024-03-19 08:34:03 ================================================================= 2024-03-19 08:34:03 ==13149==ERROR: LeakSanitizer: detected memory leaks 2024-03-19 08:34:03 2024-03-19 08:34:03 Direct leak of 904 byte(s) in 1 object(s) allocated from: 2024-03-19 08:34:03 #0 0x55f9cb5a18ee in malloc (/usr/bin/clickhouse+0xa9a48ee) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 #1 0x55fa01e34070 in CRYPTO_malloc build_docker/./contrib/openssl/crypto/mem.c:202:11 2024-03-19 08:34:03 #2 0x55fa01e34070 in CRYPTO_zalloc build_docker/./contrib/openssl/crypto/mem.c:222:11 2024-03-19 08:34:03 #3 0x55fa01d6dcca in ossl_err_get_state_int build_docker/./contrib/openssl/crypto/err/err.c:691:17 2024-03-19 08:34:03 #4 0x55fa01d71748 in ERR_set_mark build_docker/./contrib/openssl/crypto/err/err_mark.c:19:10 2024-03-19 08:34:03 #5 0x55fa01f4735b in ossl_prov_digest_load_from_params build_docker/./contrib/openssl/providers/common/provider_util.c:194:5 2024-03-19 08:34:03 ClickHouse#6 0x55fa01ff467a in hmac_set_ctx_params build_docker/./contrib/openssl/providers/implementations/macs/hmac_prov.c:307:10 2024-03-19 08:34:03 ClickHouse#7 0x55fa01ff3ef2 in hmac_init build_docker/./contrib/openssl/providers/implementations/macs/hmac_prov.c:169:37 2024-03-19 08:34:03 ClickHouse#8 0x55f9fb83c75b in Aws::Utils::Crypto::Sha256HMACOpenSSLImpl::Calculate(Aws::Utils::Array<unsigned char> const&, Aws::Utils::Array<unsigned char> const&) (/usr/bin/clickhouse+0x3ac3f75b) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#9 0x55f9fb82ebeb in Aws::Utils::Crypto::Sha256HMAC::Calculate(Aws::Utils::Array<unsigned char> const&, Aws::Utils::Array<unsigned char> const&) (/usr/bin/clickhouse+0x3ac31beb) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#10 0x55f9fb6d5afd in Aws::Client::AWSAuthV4Signer::ComputeHash(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) const (/usr/bin/clickhouse+0x3aad8afd) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#11 0x55f9fb6e0bad in Aws::Client::AWSAuthV4Signer::SignRequest(Aws::Http::HttpRequest&, char const*, char const*, bool) const (/usr/bin/clickhouse+0x3aae3bad) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#12 0x55f9fb72651d in bool smithy::components::tracing::TracingUtils::MakeCallWithTiming<bool>(std::__1::function<bool ()>, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&, smithy::components::tracing::Meter const&, std::__1::map<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>, std::__1::less<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>, std::__1::allocator<std::__1::pair<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>>>>>&&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char>> const&) (/usr/bin/clickhouse+0x3ab2951d) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#13 0x55f9fb70adcb in Aws::Client::AWSClient::AttemptOneRequest(std::__1::shared_ptr<Aws::Http::HttpRequest> const&, Aws::AmazonWebServiceRequest const&, char const*, char const*, char const*) const (/usr/bin/clickhouse+0x3ab0ddcb) (BuildId: b3766b865d6580f6dcba75acf37673d4aeedc2b6) 2024-03-19 08:34:03 ClickHouse#14 0x55f9fb6fdb17 in Aws::Client::AWSClient::AttemptExhaustively(Aws::Http::URI const&, Aws::AmazonWebServiceRequest const&, Aws::Http::HttpMethod, char const*, char const*, char cons
vitlibar
pushed a commit
that referenced
this pull request
Feb 12, 2025
CI: https://s3.amazonaws.com/clickhouse-test-reports/75848/479ca9b0a40fa32074501bea7d9eb7d369f3ddd4/integration_tests__tsan__2_6_.html <details> <summary>Race</summary> ``` E Exception: Sanitizer assert found for instance ================== E WARNING: ThreadSanitizer: data race (pid=8) E Write of size 8 at 0x726000005c78 by thread T585 (mutexes: write M0, write M1): E #0 std::__1::enable_if<is_move_constructible<DB::SnapshotFileInfo*>::value && is_move_assignable<DB::SnapshotFileInfo*>::value, void>::type std::__1::swap[abi:ne180100]<DB::SnapshotFileInfo*>(DB::SnapshotFileInfo*&, DB::SnapshotFileInfo*&) build_docker/./contrib/llvm-project/libcxx/include/__utility/swap.h:44:7 (clickhouse+0x1dad0fb6) (BuildId: eb398fb9d76a60d418ba7222d10f730fae2208dc) E #1 std::__1::shared_ptr<DB::SnapshotFileInfo>::swap[abi:ne180100](std::__1::shared_ptr<DB::SnapshotFileInfo>&) build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:694:5 (clickhouse+0x1dad0fb6) E #2 std::__1::shared_ptr<DB::SnapshotFileInfo>::operator=[abi:ne180100](std::__1::shared_ptr<DB::SnapshotFileInfo>&&) build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:663:32 (clickhouse+0x1dad0fb6) E #3 DB::KeeperStateMachine<DB::KeeperStorage<DB::SnapshotableHashTable<DB::KeeperMemNode>>>::save_logical_snp_obj(nuraft::snapshot&, unsigned long&, nuraft::buffer&, bool, bool) build_docker/./src/Coordination/KeeperStateMachine.cpp:846:30 (clickhouse+0x1dad0fb6) E Previous read of size 8 at 0x726000005c78 by thread T572: E #0 std::__1::shared_ptr<DB::SnapshotFileInfo>::shared_ptr[abi:ne180100](std::__1::shared_ptr<DB::SnapshotFileInfo> const&) build_docker/./contrib/llvm-project/libcxx/include/__memory/shared_ptr.h:565:82 (clickhouse+0x1daea9b2) (BuildId: eb398fb9d76a60d418ba7222d10f730fae2208dc) E #1 DB::KeeperStateMachine<DB::KeeperStorage<DB::SnapshotableHashTable<DB::KeeperMemNode>>>::create_snapshot(nuraft::snapshot&, std::__1::function<void (bool&, std::__1::shared_ptr<std::exception>&)>&)::'lambda'(std::__1::variant<std::__1::shared_ptr<DB::KeeperStorageSnapshot<DB::KeeperStorage<DB::SnapshotableHashTable<DB::KeeperMemNode>>>>, std::__1::shared_ptr<DB::KeeperStorageSnapshot<DB::KeeperStorage<DB::RocksDBContainer<DB::KeeperRocksNode>>>>>&&, bool)::operator()(std::__1::variant<std::__1::shared_ptr<DB::KeeperStorageSnapshot<DB::KeeperStorage<DB::SnapshotableHashTable<DB::KeeperMemNode>>>>, std::__1::shared_ptr<DB::KeeperStorageSnapshot<DB::KeeperStorage<DB::RocksDBContainer<DB::KeeperRocksNode>>>>>&&, bool) const build_docker/./src/Coordination/KeeperStateMachine.cpp:803:22 (clickhouse+0x1daea9b2) ``` </details> v2: guard latest_snapshot_meta and latest_snapshot_buf as well (thanks to @davenger)
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