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Stacked timer reporting #4138

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rppawlo
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@rppawlo rppawlo commented Jan 4, 2019

Fixed two issues. Each issue is addressed in a separate commit. Might be easier to review by commit.

  1. Addressed Teuchos: StackedTimer missing a pushRegion for kokkos profiling #4119 - stacked timer was seg faulting when using with kokkos space_time_stack profiling tool. This has been fixed. Users can control the start of the top level timer by calling startBaseTimer() or let the StackedTimer ctor automatically start it. Default is for ctor to start it automatically for backwards compatibility. The space_time_stack will seg fault if the last timer is not stopped. This was accomplished by calling stop() on the stacked timer. This function has been renamed to be consistent with the startBaseTimer() and to better describe what it really does.

  2. Fixed an issue with the parallel report() function. It was not flattening the 0 level timer correctly at the end of the recursion, so the level 0 and level 1 timers were printed on the same level.

@rppawlo rppawlo added type: bug The primary issue is a bug in Trilinos code or tests type: enhancement Issue is an enhancement, not a bug pkg: Teuchos Issues primarily dealing with the Teuchos Package AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed labels Jan 4, 2019
@rppawlo rppawlo self-assigned this Jan 4, 2019
@rppawlo rppawlo requested review from mhoemmen and bathmatt January 4, 2019 02:42
@rppawlo rppawlo requested a review from a team as a code owner January 4, 2019 02:42
@bartlettroscoe bartlettroscoe added the stage: in progress Work on the issue has started label Jan 4, 2019
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Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection Is Not Necessary for this Pull Request.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2189
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1992
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 479
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 90
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Using Repos:

Repo: TRILINOS (rppawlo/Trilinos)
  • Branch: stacked-timer-reporting
  • SHA: 8881505
  • Mode: TEST_REPO

Pull Request Author: rppawlo

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The test is missing a Kokkos::finalize. (Better yet, change it to use Kokkos::ScopeGuard.) Otherwise, looks good to me -- thanks!

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2189
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1992
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 479
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 90
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 8881505
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA aaca208


CDash Test Results for PR# 4138.

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Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
THE LAST COMMIT TO THIS PULL REQUEST HAS BEEN REVIEWED, BUT NOT ACCEPTED OR REQUIRES CHANGES

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All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

@@ -260,7 +260,7 @@ namespace Teuchos {
counter().start(reset);
#ifdef HAVE_TEUCHOS_ADD_TIME_MONITOR_TO_STACKED_TIMER
if (nonnull(stackedTimer_))
stackedTimer_->start(counter().name());
stackedTimer_->start(counter().name(),false);
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So, if you use teuchos you don't get the kokkos injection but you do if you use stacked timer directly? Should they be the same?

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This prevents double injection into kokkos. The TimeMonitor timers inject into the kokkos profiler inside the Time object. But if TimeMonitor injects data into StackedTimer as well, we were doubly injecting into kokkos.

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bathmatt commented Jan 4, 2019

I'm fine w/ this, see my one comment..

bathmatt
bathmatt previously approved these changes Jan 4, 2019
@mhoemmen mhoemmen dismissed their stale review January 4, 2019 21:27

See above discussion.

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mhoemmen commented Jan 4, 2019

@rppawlo You might want to add a Kokkos::finalize at the end, conditional on Kokkos::is_initialized(). If we ever fix #4142, then your test won't break.

@rppawlo rppawlo removed the AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed label Jan 4, 2019
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Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ bathmatt ]!

The level zero timer (end of recursion) in parallel reporting was not
being flattened correctly for output.
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Status Flag 'Pull Request AutoTester' - AutoMerge IS ENABLED, but the Label AT: AUTOMERGE is not set. Either set Label AT: AUTOMERGE or manually merge the PR...

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rppawlo commented Jan 4, 2019

You might want to add a Kokkos::finalize at the end

@mhoemmen - I've added this but now need to be approved again due to change. Could you do this?

@rppawlo rppawlo added the AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed label Jan 4, 2019
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Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection Is Not Necessary for this Pull Request.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2193
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1996
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 483
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 94
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Using Repos:

Repo: TRILINOS (rppawlo/Trilinos)
  • Branch: stacked-timer-reporting
  • SHA: 65c3205
  • Mode: TEST_REPO

Pull Request Author: rppawlo

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2193
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1996
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 483
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 94
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc
Console Output (last 100 lines) : Trilinos_pullrequest_gcc_4.8.4 # 2193 (click to expand)

[EnvInject] - Loading node environment variables.
Building remotely on ascic142-trilinos (trilinos-haswell trilinos-any) in workspace /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.8.4
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/trilinos/Trilinos # timeout=10
Fetching upstream changes from https://github.com/trilinos/Trilinos
 > git --version # timeout=10
Setting http proxy: wwwproxy.sandia.gov:80
 > git fetch --tags --progress https://github.com/trilinos/Trilinos +refs/heads/*:refs/remotes/origin/* # timeout=20
 > git rev-parse refs/remotes/origin/develop^{commit} # timeout=10
 > git rev-parse refs/remotes/origin/origin/develop^{commit} # timeout=10
Checking out Revision 5487fdcebedeb081477ec09dd3ad9efa9192948d (refs/remotes/origin/develop)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 5487fdcebedeb081477ec09dd3ad9efa9192948d
Commit message: "Merge Pull Request #4137 from trilinos/Trilinos/csiefer-7c9d622"
 > git rev-list --no-walk 5487fdcebedeb081477ec09dd3ad9efa9192948d # timeout=10
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url [email protected]:trilinos-project/TFW_single_configure_support_scripts.git # timeout=10
Fetching upstream changes from [email protected]:trilinos-project/TFW_single_configure_support_scripts.git
 > git --version # timeout=10
using GIT_SSH to set credentials Trilinos ssh key
 > git fetch --tags --progress [email protected]:trilinos-project/TFW_single_configure_support_scripts.git +refs/heads/*:refs/remotes/origin/*
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision 6b18fbd791032f935925d2a3ea1c94ca51e173fa (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 6b18fbd791032f935925d2a3ea1c94ca51e173fa
Commit message: "Add Shylu_NODE and ShyLU_DD as labels for packages"
 > git rev-list --no-walk 6b18fbd791032f935925d2a3ea1c94ca51e173fa # timeout=10
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url [email protected]:trilinos-project/TFW_testing_single_configure_prototype.git # timeout=10
Fetching upstream changes from [email protected]:trilinos-project/TFW_testing_single_configure_prototype.git
 > git --version # timeout=10
using GIT_SSH to set credentials Trilinos ssh key
 > git fetch --tags --progress [email protected]:trilinos-project/TFW_testing_single_configure_prototype.git +refs/heads/*:refs/remotes/origin/*
ERROR: Error fetching remote repo 'origin'
hudson.plugins.git.GitException: Failed to fetch from [email protected]:trilinos-project/TFW_testing_single_configure_prototype.git
	at hudson.plugins.git.GitSCM.fetchFrom(GitSCM.java:888)
	at hudson.plugins.git.GitSCM.retrieveChanges(GitSCM.java:1155)
	at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1186)
	at org.jenkinsci.plugins.multiplescms.MultiSCM.checkout(MultiSCM.java:143)
	at hudson.scm.SCM.checkout(SCM.java:504)
	at hudson.model.AbstractProject.checkout(AbstractProject.java:1208)
	at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:574)
	at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:86)
	at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:499)
	at hudson.model.Run.execute(Run.java:1794)
	at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
	at hudson.model.ResourceController.execute(ResourceController.java:97)
	at hudson.model.Executor.run(Executor.java:429)
Caused by: hudson.plugins.git.GitException: Command "git fetch --tags --progress [email protected]:trilinos-project/TFW_testing_single_configure_prototype.git +refs/heads/*:refs/remotes/origin/*" returned status code 128:
stdout: 
stderr: ssh_exchange_identification: Connection closed by remote host
fatal: The remote end hung up unexpectedly
at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandIn(CliGitAPIImpl.java:2002)
at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandWithCredentials(CliGitAPIImpl.java:1721)
at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.access$300(CliGitAPIImpl.java:72)
at org.jenkinsci.plugins.gitclient.CliGitAPIImpl$1.execute(CliGitAPIImpl.java:405)
at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$1.call(RemoteGitImpl.java:153)
at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$1.call(RemoteGitImpl.java:146)
at hudson.remoting.UserRequest.perform(UserRequest.java:212)
at hudson.remoting.UserRequest.perform(UserRequest.java:54)
at hudson.remoting.Request$2.run(Request.java:369)
at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
Suppressed: hudson.remoting.Channel$CallSiteStackTrace: Remote call to ascic142-trilinos
	at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1741)
	at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:357)
	at hudson.remoting.Channel.call(Channel.java:955)
	at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.execute(RemoteGitImpl.java:146)
	at sun.reflect.GeneratedMethodAccessor234.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.invoke(RemoteGitImpl.java:132)
	at com.sun.proxy.$Proxy91.execute(Unknown Source)
	at hudson.plugins.git.GitSCM.fetchFrom(GitSCM.java:886)
	at hudson.plugins.git.GitSCM.retrieveChanges(GitSCM.java:1155)
	at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1186)
	at org.jenkinsci.plugins.multiplescms.MultiSCM.checkout(MultiSCM.java:143)
	at hudson.scm.SCM.checkout(SCM.java:504)
	at hudson.model.AbstractProject.checkout(AbstractProject.java:1208)
	at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:574)
	at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:86)
	at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:499)
	at hudson.model.Run.execute(Run.java:1794)
	at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
	at hudson.model.ResourceController.execute(ResourceController.java:97)
	at hudson.model.Executor.run(Executor.java:429)

ERROR: Error fetching remote repo 'origin'
Archiving artifacts
Finished: FAILURE

Console Output (last 100 lines) : Trilinos_pullrequest_intel_17.0.1 # 1996 (click to expand)

Current directory: /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1

C) Get the unfiltered list of changed Trilinos packages (including 'ALL_PACKAGES')

CHANGED_PACKAGES_FULL_LIST='PanzerAdaptersSTK,TeuchosComm'

D) Filter list of changed packages to get only the PT packages

CHANGED_PACKAGES_PT_LIST='PanzerAdaptersSTK,TeuchosComm'

E) Generate the *.cmake enables file

Wrote file 'packageEnables.cmake'

  • set +x
    Enabled packages:
    -- Setting Trilinos_ENABLE_PanzerAdaptersSTK = ON
    -- Setting Trilinos_ENABLE_TeuchosComm = ON
    Set CWD = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/TFW_testing_single_configure_prototype
    Build name = PR-4138-test-Trilinos_pullrequest_intel_17.0.1-1996
    Cur dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/TFW_testing_single_configure_prototype
    Source dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/Trilinos
    Binary dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/pull_request_test
    Parallel level = 18
    skip_by_parts_submit = OFF
    skip_single_submit = ON
    skip_update_step = ON
    skip_upload_config_files = OFF
    skip_clean_build_dir = OFF
    Subproject count = 53
    Dashboard model = Experimental
    Dashboard track = Pull Request
    Running configuration:
    /projects/sems/install/rhel6-x86_64/atdm/binary-install/cmake-3.11.1-Linux-x86_64/bin/cmake
    -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/Trilinos/cmake/std/PullRequestLinuxIntelTestingSettings.cmake"
    -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/packageEnables.cmake"
    -DTrilinos_ENABLE_TESTS:BOOL=ON
    -G "Ninja"
    /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_intel_17.0.1/Trilinos
    CTEST_DROP_LOCATION = /cdash/submit.php?project=Trilinos
    CDash URL1 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=3&showfilters=1&filtercombine=and&field1=site&compare1=61&value1=ascic158&field2=buildname&compare2=61&value2=PR-4138-test-Trilinos_pullrequest_intel_17.0.1-1996&field3=buildstamp&compare3=61&value3=20190104-2217-Pull Request
    CDash URL2 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_intel_17.0.1-1996&field2=buildstamp&compare2=61&value2=20190104-2217-Pull Request
    CDash URL3 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_intel_17.0.1-1996&field2=buildstamp&compare2=61&value2=20190104-2217-Pull Request
    Starting configure step.
    Each . represents 1024 bytes of output
    .................................................. Size: 50K
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    .................................................. Size: 150K
    .................................................. Size: 200K
    .................................................. Size: 250K
    .................................................. Size: 300K
    .................................................. Size: 350K
    .................... Size of output: 369K
    configure submit error = 0
    Configure suceeded.
    Starting build step.
    Each symbol represents 1024 bytes of output.
    .................................................. Size: 49K
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    .................................................. Size: 1649K
    .................................................. Size: 1699K
    ............. Size of output: 1712K
    Build succeeded.
    build submit error = 0
    Starting testing step.
    Tests succeeded.
    test submit error = 0
    File upload submit error = 0
    Archiving artifacts
    Finished: SUCCESS
Console Output (last 100 lines) : Trilinos_pullrequest_gcc_4.9.3_SERIAL # 483 (click to expand)

Current directory: /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL

C) Get the unfiltered list of changed Trilinos packages (including 'ALL_PACKAGES')

CHANGED_PACKAGES_FULL_LIST='PanzerAdaptersSTK,TeuchosComm'

D) Filter list of changed packages to get only the PT packages

CHANGED_PACKAGES_PT_LIST='PanzerAdaptersSTK,TeuchosComm'

E) Generate the *.cmake enables file

Wrote file 'packageEnables.cmake'

  • set +x
    Enabled packages:
    -- Setting Trilinos_ENABLE_PanzerAdaptersSTK = ON
    -- Setting Trilinos_ENABLE_TeuchosComm = ON
    Set CWD = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/TFW_testing_single_configure_prototype
    Build name = PR-4138-test-Trilinos_pullrequest_gcc_4.9.3_SERIAL-483
    Cur dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/TFW_testing_single_configure_prototype
    Source dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/Trilinos
    Binary dir = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/pull_request_test
    Parallel level = 18
    skip_by_parts_submit = OFF
    skip_single_submit = ON
    skip_update_step = ON
    skip_upload_config_files = OFF
    skip_clean_build_dir = OFF
    Subproject count = 53
    Dashboard model = Experimental
    Dashboard track = Pull Request
    Running configuration:
    /projects/sems/install/rhel7-x86_64/sems/utility/cmake/3.10.3/bin/cmake
    -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/Trilinos/cmake/std/PullRequestLinuxGCC4.9.3TestingSettingsSERIAL.cmake"
    -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/packageEnables.cmake"
    -DTrilinos_ENABLE_TESTS:BOOL=ON
    -G "Ninja"
    /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_4.9.3_SERIAL/Trilinos
    CTEST_DROP_LOCATION = /cdash/submit.php?project=Trilinos
    CDash URL1 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=3&showfilters=1&filtercombine=and&field1=site&compare1=61&value1=ascic166&field2=buildname&compare2=61&value2=PR-4138-test-Trilinos_pullrequest_gcc_4.9.3_SERIAL-483&field3=buildstamp&compare3=61&value3=20190104-2218-Pull Request
    CDash URL2 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_gcc_4.9.3_SERIAL-483&field2=buildstamp&compare2=61&value2=20190104-2218-Pull Request
    CDash URL3 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_gcc_4.9.3_SERIAL-483&field2=buildstamp&compare2=61&value2=20190104-2218-Pull Request
    Starting configure step.
    Each . represents 1024 bytes of output
    .................................................. Size: 50K
    .................................................. Size: 100K
    .................................................. Size: 150K
    .................................................. Size: 200K
    .................................................. Size: 250K
    .................................................. Size: 300K
    ....................................... Size of output: 338K
    configure submit error = 0
    Configure suceeded.
    Starting build step.
    Each symbol represents 1024 bytes of output.
    .................................................. Size: 49K
    .................................................. Size: 99K
    .................................................. Size: 149K
    .................................................. Size: 200K
    .................................................. Size: 249K
    .................................................. Size: 299K
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    .................................................. Size: 1749K
    .................................................. Size: 1799K
    ............ Size of output: 1811K
    Build succeeded.
    build submit error = 0
    Starting testing step.
    Tests succeeded.
    test submit error = 0
    File upload submit error = 0
    Archiving artifacts
    Finished: SUCCESS
Console Output (last 100 lines) : Trilinos_pullrequest_gcc_7.2.0 # 94 (click to expand)

+ set +x
Enabled packages:
-- Setting Trilinos_ENABLE_PanzerAdaptersSTK = ON
-- Setting Trilinos_ENABLE_TeuchosComm = ON
Set CWD = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/TFW_testing_single_configure_prototype
Build name               = PR-4138-test-Trilinos_pullrequest_gcc_7.2.0-94
Cur dir                  = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/TFW_testing_single_configure_prototype
Source dir               = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/Trilinos
Binary dir               = /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/pull_request_test
Parallel level           = 18
skip_by_parts_submit     = OFF
skip_single_submit       = ON
skip_update_step         = ON
skip_upload_config_files = OFF
skip_clean_build_dir     = OFF
Subproject count         = 53
Dashboard model          = Experimental
Dashboard track          = Pull Request
Running configuration:
/projects/sems/install/rhel6-x86_64/atdm/binary-install/cmake-3.11.1-Linux-x86_64/bin/cmake 
  -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/Trilinos/cmake/std/PullRequestLinuxGCC7.2.0TestingSettings.cmake"
  -C "/scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/packageEnables.cmake"
  -DTrilinos_ENABLE_TESTS:BOOL=ON
  -G "Ninja"
  /scratch/trilinos/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0/Trilinos
CTEST_DROP_LOCATION = /cdash/submit.php?project=Trilinos
CDash URL1 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=3&showfilters=1&filtercombine=and&field1=site&compare1=61&value1=ascic158&field2=buildname&compare2=61&value2=PR-4138-test-Trilinos_pullrequest_gcc_7.2.0-94&field3=buildstamp&compare3=61&value3=20190104-2217-Pull Request
CDash URL2 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&display=project&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_gcc_7.2.0-94&field2=buildstamp&compare2=61&value2=20190104-2217-Pull Request
CDash URL3 = https://testing-vm.sandia.gov/cdash/index.php?project=Trilinos&filtercount=2&showfilters=0&filtercombine=and&field1=buildname&compare1=61&value1=PR-4138-test-Trilinos_pullrequest_gcc_7.2.0-94&field2=buildstamp&compare2=61&value2=20190104-2217-Pull Request
Starting configure step.
   Each . represents 1024 bytes of output
    ..................................................  Size: 50K
    ..................................................  Size: 100K
    ..................................................  Size: 150K
    ..................................................  Size: 200K
    ..................................................  Size: 250K
    ..................................................  Size: 300K
    ..................................................  Size: 350K
    .................... Size of output: 369K
configure submit error = 0
Configure suceeded.
Starting build step.
   Each symbol represents 1024 bytes of output.
    ..................................................  Size: 49K
    ..................................................  Size: 99K
    ..................................................  Size: 149K
    ..................................................  Size: 199K
    ..................................................  Size: 249K
    ..................................................  Size: 299K
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    ..................................................  Size: 1149K
    ..................................................  Size: 1199K
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    ..................................................  Size: 1299K
    ..................................................  Size: 1349K
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    ..................................................  Size: 1449K
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    ..................................................  Size: 2249K
    ..................................................  Size: 2299K
    ..................................................  Size: 2349K
    ..................................................  Size: 2399K
    . Size of output: 2400K
Build succeeded.
build submit error = 0
Starting testing step.
Tests succeeded.
test submit error = 0
File upload submit error = 0
Archiving artifacts
Finished: SUCCESS


CDash Test Results for PR# 4138.


Wiki: How to Reproduce PR Testing Builds and Errors.

@mhoemmen mhoemmen added the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 5, 2019
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2195
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1998
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 485
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 96
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Using Repos:

Repo: TRILINOS (rppawlo/Trilinos)
  • Branch: stacked-timer-reporting
  • SHA: 65c3205
  • Mode: TEST_REPO

Pull Request Author: rppawlo

@trilinos-autotester
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Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

Build Information

Test Name: Trilinos_pullrequest_gcc_4.8.4

  • Build Num: 2195
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
COMPILER_MODULE sems-gcc/4.8.4
JENKINS_BUILD_TYPE Release
JENKINS_COMM_TYPE MPI
JENKINS_DO_COMPLEX OFF
JENKINS_JOB_TYPE Experimental
MPI_MODULE sems-openmpi/1.8.7
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_intel_17.0.1

  • Build Num: 1998
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_4.9.3_SERIAL

  • Build Num: 485
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc

Build Information

Test Name: Trilinos_pullrequest_gcc_7.2.0

  • Build Num: 96
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
PULLREQUESTNUM 4138
TEST_REPO_ALIAS TRILINOS
TRILINOS_SOURCE_BRANCH stacked-timer-reporting
TRILINOS_SOURCE_REPO https://github.com/rppawlo/Trilinos
TRILINOS_SOURCE_SHA 65c3205
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 5487fdc


CDash Test Results for PR# 4138.

@trilinos-autotester trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 5, 2019
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Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ mhoemmen ]!

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Status Flag 'Pull Request AutoTester' - Pull Request will be Automerged

@trilinos-autotester trilinos-autotester merged commit b4b3de1 into trilinos:develop Jan 5, 2019
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Merge on Pull Request# 4138: IS A SUCCESS - Pull Request successfully merged

@trilinos-autotester trilinos-autotester removed the AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed label Jan 5, 2019
@bartlettroscoe bartlettroscoe removed the stage: in progress Work on the issue has started label Jan 5, 2019
@rppawlo rppawlo deleted the stacked-timer-reporting branch January 7, 2019 16:32
jhux2 added a commit that referenced this pull request Jan 15, 2019
This necessary for the Kokkos profiling tools to work properly
with the stacked timers.  See comment in item 1 of
#4138 (comment).
wfspotz pushed a commit to wfspotz/Trilinos that referenced this pull request Jan 17, 2019
This necessary for the Kokkos profiling tools to work properly
with the stacked timers.  See comment in item 1 of
trilinos#4138 (comment).
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Labels
pkg: Teuchos Issues primarily dealing with the Teuchos Package type: bug The primary issue is a bug in Trilinos code or tests type: enhancement Issue is an enhancement, not a bug
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5 participants