#

ome-tiff

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nf-core / mcmicro

An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.

workflow pipeline nextflow image-processing spatial stitching registration segmentation image-analysis single-cell microscopy ome-tiff nf-core tma bioformats multiplexed-imaging

Updated Jan 27, 2025
Nextflow

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