LLM-based ontological extraction tools, including SPIRES
Ontology for the description of human clinical features
Bootstrap an OBO Library ontology
Mondo Disease Ontology
A Tool to Annotate and Prioritize Exome Variants
Schema and generated objects for biolink data model and upper ontology
An ontology of cell types
Simple Standard for Sharing Ontology Mappings
Ontology Access Kit: A python library and command line application for working with ontologies
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Repository for the GA4GH phenopacket schema
LLM-driven curation assist tool
An instance of KG Hub to produce a knowledge graph for COVID-19 response.
Medical action ontology
Data transformation framework for LinkML data models
Ontology for representing scientific evidence and provenance information
A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
Java library to map LOINC-encoded test results to Human Phenotype Ontology
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