Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)

mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari

a tool for predicting mitochondrial DNA deletions using soft-clipping

Mitochondrial Alteration Enrichment and Genome Analysis Toolkit

Module and script to remove contamination in assembled genomes before submission to ncbi

MToolBox pipeline written in snakemake to allow a better scalability

Infer the dynamics of mitochondrial heteroplasmy during different life stages using population genetics and phylogenetics

LOCALIZER: subcellular localization prediction of plant and effector proteins in the plant cell

Toolbox for Identifying Mitochondria Instance Segmentation Errors

Python package to plot variants on the human mitochondrial genome.

MitoMut is a tool to call mitochondrial deletions from next generation sequencing (NGS) data

Do you like how energy is made in our cells? Well, this program has the goal to simulate aerobic respiration, latic fermentation and alcoholic fermentation!

A snakemake pipeline wrapping MitoZ and getOrganelle for de novo mitogenome assembly using short reads and subsequent QC.

This repository contains all the code used for the publication "Morphological principles of neuronal mitochondria".

Taxonomic classification and read binning of mitochondrial DNA

Complements mitoSim - the simulator of cell mitochondria as a spacelss graph.

A mitochondrial analysis tool for the vEM dataset.