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dropseq

Here are 3 public repositories matching this topic...

Hoohm / dropSeqPipe

A SingleCell RNASeq pre-processing snakemake workflow

yaml picard snakemake pipeline plot conda multiqc star umi reference-genome drop-seq dropseq scrbseq scrb-seq dropseqtools

Updated Jan 11, 2023
Python

Hoohm / CITE-seq-Count

A tool that allows to get UMI counts from a single cell protein assay

single-cell 10x dropseq citeseq

Updated Jul 22, 2024
Python

BIMSBbioinfo / pigx_scrnaseq

Pipeline for analysis of Dropseq single cell data

guix snakemake-workflows dropseq single-cell-rna-seq

Updated Nov 14, 2024
Python

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