#

bulk-rna-seq

Here are 6 public repositories matching this topic...

earmingol / cell2cell

User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

machine-learning bioinformatics rna-seq computational-biology rnaseq single-cell single-cell-rna-seq bulk-rna-seq sc-rna-seq cell-cell-interaction cell-cell-communication

Updated Jun 14, 2024
Python

IGS / gEAR

The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.

rna-seq gene-expression single-cell single-cell-analysis bulk-rna-seq data-archive

Updated Feb 4, 2025
Python

QBRC / QBRC_BulkRnaSeqDE

Analysis pipeline for bulk RNA-seq data

alignment differential-expression bulk-rna-seq

Updated Aug 18, 2022
Python

namini94 / EXPORT

EXPORT: Explainable VAE for ordinally perturbed transcriptomics data

vae drug-discovery transcriptomics single-cell pathway-analysis dose-response-modeling bulk-rna-seq

Updated Dec 18, 2024
Python

metavannier / metatranscriptomics-bulkrnaseq_workflow

This workflow performs a metatranscriptomics and bulk RNAseq analysis from the sequencing output data to the differential expression analyses.

docker bioinformatics snakemake singularity slurm-cluster metatranscriptomics conda-environment bulk-rna-seq

Updated Jul 27, 2022
Python

maxozo / eqtl

scrna-seq eqtl bulk-rna-seq eqtl-mapping

Updated Oct 26, 2023
Python

Improve this page

Add a description, image, and links to the bulk-rna-seq topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the bulk-rna-seq topic, visit your repo's landing page and select "manage topics."