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V1.1.1#110

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sokrypton merged 19 commits intov1.1.1-betasokrypton/ColabDesign:v1.1.1-betafrom v1.1.1sokrypton/ColabDesign:v1.1.1Copy head branch name to clipboardJan 17, 2023

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Commits

Commits on Dec 26, 2022

• backup of original notebook

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Commits on Dec 27, 2022

• major update to af_pseudo_diffusion_dgram notebook

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• bugfix in recycle protocol

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• bugfix (noise was not being decaded)

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Commits on Dec 28, 2022

• updating default settings

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• restoring old notebook for now... (still debuggin')

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Commits on Dec 31, 2022

• adding i_cmap output, removing redundant opt (cmap_cutoff)

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Commits on Jan 3, 2023

• Update design.py

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Commits on Jan 6, 2023

• minor edits

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• Update model.py

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Commits on Jan 8, 2023

• remove assert to "fix" compatibility issue

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Commits on Jan 10, 2023

• Update model.py

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Commits on Jan 16, 2023

• replace np.int with np.int32 dtype to fix numpy error

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• bugfix: design_semigreedy() wasn't using input bias when seq_logits was defined

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Commits on Jan 17, 2023

• Update design.py

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• Update design.py

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• bugfix: bias was not being used in semigreedy protocol

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• Update design.py

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• Merge branch 'v1.1.1-beta' into v1.1.1

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