Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[python] Reader for 10x HDF5 matrix file #3762

Open
wants to merge 4 commits into
base: main
Choose a base branch
from
Open

Conversation

jp-dark
Copy link
Collaborator

@jp-dark jp-dark commented Mar 6, 2025

Issue and/or context: sc-64133

Create a reader for ingesting 10x HDF5 matrix without first ingesting into AnnData, for Visium ingestion.

Copy link

codecov bot commented Mar 6, 2025

Codecov Report

Attention: Patch coverage is 93.54839% with 10 lines in your changes missing coverage. Please review.

Project coverage is 89.32%. Comparing base (4eb9f8b) to head (46751f7).
Report is 1 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #3762      +/-   ##
==========================================
+ Coverage   89.19%   89.32%   +0.12%     
==========================================
  Files          54       54              
  Lines        6416     6556     +140     
==========================================
+ Hits         5723     5856     +133     
- Misses        693      700       +7     
Flag Coverage Δ
python 89.32% <93.54%> (+0.12%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Components Coverage Δ
python_api 89.32% <93.54%> (+0.12%) ⬆️
libtiledbsoma ∅ <ø> (∅)
🚀 New features to boost your workflow:
  • Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant