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  1. vcf2sfs vcf2sfs Public

    R functions for generating site frequency spectra (SFS) from a VCF file.

    R 27 8

  2. plotFastStructure plotFastStructure Public

    Plot fastStructure results in R

    R 2 1

  3. ABBA_BABA ABBA_BABA Public

    Running ABBA BABA test in R

    R 1 2

  4. Find-inversions Find-inversions Public

    Find inversions in the genome using high-density SNP data of multiple populations

    R 1

  5. VCF_HWF VCF_HWF Public

    Filter away SNPs that are out of Hardy-Weinberg equilibrium from a VCF file.

    R

  6. toga2synteny toga2synteny Public

    Generate a chromosomal synteny map among a group of species based on TOGA annotation

    R