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Chemining is an automated and user-friendly tool to retrieve user-selected data from PubChem and ChEBI. From only compounds name (SMILES and molecular formula optional) checked by Chemining, identifiers, physical-chemical parameters and ontology data are extracted and delivered in Excel format. View the video tutorial for more information.

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Chemining Chemining is an automated and user-friendly tool to retrieve user-selected data from PubChem and ChEBI. From only compounds name (SMILES and molecular formula optional) checked by Chemining, identifiers, physical-chemical parameters and ontology data are extracted and delivered in Excel format.

Click on the following link to download the installation file "Chemining_1.0.3-setup.exe".
For more information, view the video tutorial on YouTube or by downloading the file "Chemining-tutorial.zip".
The video is fast, do not hesitate to pause it with the space bar or use a slower pace to read it.

Development

Chemining was developed in Python 3.9 on Windows 10.

Tutorial

To get started with Chemining, you can view the tutorial:

  • either on YouTube directly
  • or if you want to browse the video using the table of contents (recommended):

    tutorial_summary

    ➪ Please download the file "Chemining-tutorial.zip" and launch in your web browser the file "Chemining-tutorial_player.html" present in the zip file.
    The video is fast, do not hesitate to pause it with the space bar or use a slower pace to read it.

Help and Technical support

If you encounter any problems, please contact the developers at this address: [email protected] or post your issue on this GitHub repository based on the file "Issue_template.md".

About

Chemining is an automated and user-friendly tool to retrieve user-selected data from PubChem and ChEBI. From only compounds name (SMILES and molecular formula optional) checked by Chemining, identifiers, physical-chemical parameters and ontology data are extracted and delivered in Excel format. View the video tutorial for more information.

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