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A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

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rijksuniversiteit-groningen/iBridges

 
 

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iBridges

About

iBridges is library for scientific programmers who are working with data in iRODS. We provide a wrapper around the python-irodsclient to facilitate easy interaction with the iRODS server.

Since iBridges is solely based on python it works on all operating systems.

  • Runs on Python 3.8 or higher.
  • Supported iRODS server versions: 4.2.11 or higher and 4.3.0 or higher.

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Installation

From Github repository

git clone [email protected]:UtrechtUniversity/iBridges.git
cd iBridges
pip install .

Pypi install

pip install ibridges

Usage

# Create an iRODS session
from ibridges import Session

session = Session(irods_env_path="~/.irods/irods_environment.json", password="mypassword")

# Upload data
from ibridges import upload

upload(session, "/your/local/path", "/irods/path")

# Download data
from ibridges import download

download(session, "/irods/path", "/other/local/path")

Tutorials

Documentation

Guides

Beginners tutorials

Authors

Christine Staiger (Maintainer) ORCID

  • Wageningen University & Research 2021 - 2022
  • Utrecht University 2022

Tim van Daalen, Wageningen University & Research 2021

Maarten Schermer (Maintainer) ORCID, Utrecht University 2023

Raoul Schram (Maintainer) ORCID. Utrecht University 2023

Contributors

J.P. Mc Farland, University of Groningen, Center for Information Technology, 2022

License

This project is licensed under the GPL-v3 license. The full license can be found in LICENSE.

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A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

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