added Motiti MPAs

quantifish · Sep 18, 2024 · c7d52dd · c7d52dd
1 parent f78bcae
commit c7d52dd
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Showing 42 changed files with 40 additions and 20 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -49,7 +49,7 @@ Remotes:
     ropensci/rnaturalearthhires
 LazyData: true
 LazyDataCompression: bzip2
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.2
 VignetteBuilder: knitr
 Collate: 
     'nzsf.R'

diff --git a/data-raw/prepare-data.R b/data-raw/prepare-data.R
@@ -1,7 +1,7 @@
 library(usethis)
 library(sf)
 library(tidyverse)
-library(rgdal)
+# library(rgdal)
 library(raster)
 library(ncdf4)
 library(stars)
@@ -215,6 +215,15 @@ use_data(rock_lobster_stat_areas, overwrite = TRUE)
 
 doc_marine_reserves <- unzip_and_clean("kx-doc-marine-reserves-SHP.zip") %>%
   select(Name)
+
+motiti_marine_reserves <- unzip_and_clean("Coastal_Plan%3A_Motiti_Protection_Area_(Operative_11_Aug_2021).zip") %>%
+  rename(Name = Protection) %>%
+  select(Name) %>%
+  st_transform(crs = st_crs(doc_marine_reserves))
+
+doc_marine_reserves <- doc_marine_reserves %>%
+  bind_rows(motiti_marine_reserves)
+
 use_data(doc_marine_reserves, overwrite = TRUE)
 
 # Marine habitats ----

diff --git a/data/CCSBT.rda b/data/CCSBT.rda
diff --git a/data/Cockle_QMA.rda b/data/Cockle_QMA.rda
diff --git a/data/FisheriesManagementAreas.rda b/data/FisheriesManagementAreas.rda
diff --git a/data/HAKE_QMA.rda b/data/HAKE_QMA.rda
diff --git a/data/HOKI_QMA.rda b/data/HOKI_QMA.rda
diff --git a/data/JackMackerel_QMA.rda b/data/JackMackerel_QMA.rda
diff --git a/data/LING_QMA.rda b/data/LING_QMA.rda
diff --git a/data/OREO_QMA.rda b/data/OREO_QMA.rda
diff --git a/data/OrangeRoughy_QMA.rda b/data/OrangeRoughy_QMA.rda
diff --git a/data/PackhorseRockLobster_QMA.rda b/data/PackhorseRockLobster_QMA.rda
diff --git a/data/Paua_QMA.rda b/data/Paua_QMA.rda
diff --git a/data/Pipi_QMA.rda b/data/Pipi_QMA.rda
diff --git a/data/SIOFA.rda b/data/SIOFA.rda
diff --git a/data/SPRFMO.rda b/data/SPRFMO.rda
diff --git a/data/Scallop_QMA.rda b/data/Scallop_QMA.rda
diff --git a/data/SilverWarehou_QMA.rda b/data/SilverWarehou_QMA.rda
diff --git a/data/SouthernBlueWhiting_QMA.rda b/data/SouthernBlueWhiting_QMA.rda
diff --git a/data/SpinyRedRockLobster_QMA.rda b/data/SpinyRedRockLobster_QMA.rda
diff --git a/data/ccamlr_eez.rda b/data/ccamlr_eez.rda
diff --git a/data/ccamlr_mpa.rda b/data/ccamlr_mpa.rda
diff --git a/data/ccamlr_ssru.rda b/data/ccamlr_ssru.rda
diff --git a/data/ccamlr_statistical_areas.rda b/data/ccamlr_statistical_areas.rda
diff --git a/data/coastline_polyline_hydro_14k_122k.rda b/data/coastline_polyline_hydro_14k_122k.rda
diff --git a/data/doc_marine_reserves.rda b/data/doc_marine_reserves.rda
diff --git a/data/exclusive_economic_zone_outer_limits_200_mile.rda b/data/exclusive_economic_zone_outer_limits_200_mile.rda
diff --git a/data/nz_coastlines_and_islands_polygons_topo_1250k.rda b/data/nz_coastlines_and_islands_polygons_topo_1250k.rda
diff --git a/data/nz_coastlines_and_islands_polygons_topo_1500k.rda b/data/nz_coastlines_and_islands_polygons_topo_1500k.rda
diff --git a/data/nz_coastlines_and_islands_polygons_topo_150k.rda b/data/nz_coastlines_and_islands_polygons_topo_150k.rda
diff --git a/data/nz_coastlines_topo_1250k.rda b/data/nz_coastlines_topo_1250k.rda
diff --git a/data/nz_coastlines_topo_1500k.rda b/data/nz_coastlines_topo_1500k.rda
diff --git a/data/nz_coastlines_topo_150k.rda b/data/nz_coastlines_topo_150k.rda
diff --git a/data/nz_general_statistical_areas.rda b/data/nz_general_statistical_areas.rda
diff --git a/data/nz_inshore_statistical_areas.rda b/data/nz_inshore_statistical_areas.rda
diff --git a/data/nz_rivers.rda b/data/nz_rivers.rda
diff --git a/data/rock_lobster_stat_areas.rda b/data/rock_lobster_stat_areas.rda
diff --git a/data/territorial_sea_outer_limit_12_mile.rda b/data/territorial_sea_outer_limit_12_mile.rda
diff --git a/man/nzsf.Rd b/man/nzsf.Rd
diff --git a/vignettes/CRA1.png b/vignettes/CRA1.png
diff --git a/vignettes/nzsf.Rmd b/vignettes/nzsf.Rmd
@@ -13,10 +13,7 @@ editor_options:
 ---
 
 ```{r, include = FALSE}
-knitr::opts_chunk$set(
-  collapse = TRUE,
-  comment = "#>"
-)
+knitr::opts_chunk$set(collapse = TRUE, comment = "#>")
 ```
 
 The `nzsf` package relies heavily on the R packages `ggplot2`, `dplyr`, and `sf`. Maps can be built up in layers in the same way as `ggplot2`.

diff --git a/vignettes/nzsf.html b/vignettes/nzsf.html