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@qiime2

QIIME 2

Welcome to the QIIME 2 GitHub Organization! 👋

If you're a QIIME 2 user or developer, or are thinking about becoming one, refer to our Support Guidelines for details on how to learn or get help with QIIME 2.

If you're interested in contributing to repositories in the qiime2 GitHub organization, please start by reading our Contributing Guidelines.

This organization is primarily managed by the Caporaso Lab at Northern Arizona University, but has contributors from all over the world. If you have questions that aren't covered in the resources above, the best way to reach us is on the QIIME 2 Forum - it's where we hang out.

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  1. qiime2 qiime2 Public

    Source for the QIIME 2 Framework (Q2F).

    Python 499 243

  2. distributions distributions Public

    Makefile 1 5

  3. q2cli q2cli Public

    Command line interface for QIIME 2

    Python 19 25

  4. docs docs Public

    Python 21 58

Repositories

Showing 10 of 78 repositories
  • distributions Public
    qiime2/distributions’s past year of commit activity
    Makefile 1 BSD-3-Clause 5 4 2 Updated Apr 13, 2025
  • library Public

    A website for sharing QIIME 2 Plugins

    qiime2/library’s past year of commit activity
    Svelte 0 BSD-3-Clause 1 2 0 Updated Apr 13, 2025
  • qiime2 Public

    Source for the QIIME 2 Framework (Q2F).

    qiime2/qiime2’s past year of commit activity
    Python 499 BSD-3-Clause 243 67 (5 issues need help) 7 Updated Apr 10, 2025
  • q2view Public

    A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

    qiime2/q2view’s past year of commit activity
    TypeScript 1 BSD-3-Clause 1 3 1 Updated Apr 10, 2025
  • q2cli Public

    Command line interface for QIIME 2

    qiime2/q2cli’s past year of commit activity
    Python 19 BSD-3-Clause 25 14 1 Updated Apr 10, 2025
  • homepage Public

    QIIME 2 Homepage

    qiime2/homepage’s past year of commit activity
    Astro 0 MIT 0 0 0 Updated Apr 9, 2025
  • q2-vsearch Public

    vsearch plugin for QIIME 2

    qiime2/q2-vsearch’s past year of commit activity
    Python 6 BSD-3-Clause 23 8 0 Updated Apr 9, 2025
  • q2-fmt Public

    q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!

    qiime2/q2-fmt’s past year of commit activity
    Python 4 BSD-3-Clause 11 7 1 Updated Apr 9, 2025
  • amplicon-docs Public

    Source for QIIME 2 amplicon documentation.

    qiime2/amplicon-docs’s past year of commit activity
    Makefile 0 0 4 0 Updated Apr 9, 2025
  • .github Public
    qiime2/.github’s past year of commit activity
    0 2 0 0 Updated Apr 8, 2025

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