1.3.4 (#53)

* deps: bump biopipen to 0.27.3

* 1.3.4

docs/CHANGELOG.md

@@ -1,5 +1,15 @@
 # Change Log
 
+## 1.3.4
+
+- deps: bump biopipen to 0.27.3
+    - deps: bump pipen-poplog to 0.1.2 (quick fix for populating logs when job fails)
+    - deps: temporary fix copier breaks with pyyaml-include v2 (copier-org/copier#1568)
+    - choir(scrna.ScFGSEA): Skip cases when no cells found (#50)
+    - choir(scrna.MarkersFinder): Skip cases when no cells found (#50)
+    - choir(scrna.MetaMarkers): Skip cases when no cells found (#50)
+    - feat(scrna.SeuratPreparing): support `DoubletFinder` (#52)
+
 ## 1.3.3
 
 - deps: temporary fix copier breaks with pyyaml-include v2 (copier-org/copier#1568)

immunopipe/version.py

@@ -1 +1 @@
-__version__ = "1.3.3"
+__version__ = "1.3.4"

pyproject.toml

@@ -6,7 +6,7 @@ build-backend = "poetry.core.masonry.api"
 name = "immunopipe"
 description = "A pipeline for integrative analysis for scTCR- and scRNA-seq data"
 authors = [ "pwwang <[email protected]>",]
-version = "1.3.3"
+version = "1.3.4"
 license = "GNU General Public License v3.0"
 readme = "README.md"
 homepage = "https://github.com/pwwang/immunopipe"
@@ -19,9 +19,8 @@ generate-setup-file = true
 python = "^3.9"
 pipen-diagram = { version = "^0.11", optional = true }
 pipen-runinfo = { version = "^0.6", optional = true }
-pyyaml-include = "1.*" # https://github.com/copier-org/copier/issues/1568
 # pipen-report and pipen-board are required by biopipen
-biopipen = "^0.27.2"
+biopipen = "^0.27.3"
 
 [tool.poetry.extras]
 diagram = ["pipen-diagram"]