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Commits on Jan 21, 2025

• Merge pull request #8 from populationgenomics/add-say-hi

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• feat(cpg_flow_test/,cpg_flow_test/jobs/): add new job to test workflow

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Commits on Jan 20, 2025

• Merge pull request #7 from populationgenomics/run-test-bugfix

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• build(pyproject.toml,uv.lock): upgrade analysis-runner==3.2.2

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• fix(run-test-workflow.sh): re-add comment on line 48

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Commits on Jan 14, 2025

• Merge pull request #5 from populationgenomics/add-show-workflow

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• build(pyproject.toml,uv.lock): rm local cpg-flow

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Commits on Jan 13, 2025

• fix(./,cpg_flow_test/): resolve merge with main

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• Merge pull request #4 from populationgenomics/SET-327-Fill-out-the-main-README.md-for-test_workflows_shared

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• fix(cpg_flow_test/config.toml): run all stages in test workflow

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• build(pyproject.toml,uv.lock): upgrade analysis runner to 3.2.1

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Commits on Jan 9, 2025

• build: ignore analysis config and rm dev cpg-flow

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• fix(./,cpg_flow_test/): show workflow to true

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• build(pyproject.toml,uv.lock): re-add cpg-flow dev dep

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• fix(run-test-workflow.sh): if restructure

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• fix(run-test-workflow.sh): skip on sigkill

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• style(run-test-workflow.sh): if style

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• fix(run-test-workflow.sh): add check for docker command

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• fix(run-test-workflow.sh): check manifest instead of pull

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• fix(run-test-workflow.sh): docker test

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• fix(run-test-workflow.sh): syntax error

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• fix(run-test-workflow.sh): add check for docker image

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• build(pyproject.toml,uv.lock): update analysis-runner

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• fix(cpg_flow_test/config.toml): add show_workflow

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Commits on Jan 8, 2025

• Merge pull request #3 from populationgenomics/first-test-workflow

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Commits on Dec 16, 2024

• style(cpg_flow_test/stages.py): fix import sorting

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Commits on Dec 15, 2024

• style(cpg_flow_test/stages.py): json -> txt

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Commits on Dec 13, 2024

• test(iterative_digit_sum.py): smaller iterative sum (/2)

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• test(cpg_flow_test/stages.py): rm print inputs

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• test(cpg_flow_test/stages.py): print dict(inputs)

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• test(cpg_flow_test): tell make_outputs about all jobs

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• test(filter_evens.py,cpg_flow_test/stages.py): print inputs

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• test(cpg_flow_test/): add sg.id to all jobs

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• fix(cpg_flow_test/,cpg_flow_test/jobs/): fix dependency in first stage

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• test(iterative_digit_sum.py): modify logic to confirm force re-run works

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