refactor: rename workflow.py to main.py

in order to remove confusion with workflow.py in cpg_flow
populationgenomics · Jan 22, 2025 · b01c169 · b01c169
1 parent 2454dd1
commit b01c169
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diff --git a/README.md b/README.md
@@ -54,7 +54,7 @@ By combining rigorous testing capabilities with a standardised development frame
 * The `jobs` and `stages` are defined in separate files:
   * The `cpg_flow_test/jobs/` directory contains the job definitions that can be reused across stages.
   * The `cpg_flow_test/stages.py` file contains the stage definitions, which call the jobs.
-* The `cpg_flow_test/workflow.py` file contains the test workflow definition.
+* The `cpg_flow_test/main.py` file contains the test workflow definition and is the pipeline entry-point.
 
 ## How To Use
 

diff --git a/cpg_flow_test/workflow.py → cpg_flow_test/main.py b/cpg_flow_test/workflow.py → cpg_flow_test/main.py
diff --git a/cpg_flow_test/run-test-workflow.sh b/cpg_flow_test/run-test-workflow.sh
@@ -82,7 +82,7 @@ echo "analysis-runner
   --access-level "test"
   --output-dir "cpg-flow_test"
   --config "config.toml"
-  workflow.py"
+  main.py"
 
 analysis-runner \
   --image "$IMAGE_PATH" \
@@ -91,4 +91,4 @@ analysis-runner \
   --access-level "test" \
   --output-dir "cpg-flow_test" \
   --config "config.toml" \
-  workflow.py
+  main.py