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    55 repositories

    • microdraw

      Public
      Collaborative vectorial annotation tool for ultra high resolution data
      hacktoberfest
      JavaScript
      •
      GNU General Public License v3.0
      •42•23•25•2•Updated Feb 2, 2025Feb 2, 2025

    • neuroanatomy.github.com

      Public
      JavaScript
      •2•3•1•0•Updated Feb 2, 2025Feb 2, 2025

    • nwl-components

      Public
      Vue components for the Neuroweblab frontend
      Vue
      •0•0•1•0•Updated Jan 21, 2025Jan 21, 2025

    • BrainBox

      Public
      BrainBox is a web application that lets you annotate and segment 3D brain imaging data in real time, collaboratively.
      hacktoberfestnaat
      JavaScript
      •
      Other
      •47•99•81•5•Updated Aug 29, 2024Aug 29, 2024

    • neuroimaging-zombies-ohbm-2024

      Public
      Utilities for neuroimaging zombies project at OHBM 2024 Hackathon
      Jupyter Notebook
      •1•0•0•0•Updated Jun 26, 2024Jun 26, 2024

    • thresholdmann

      Public
      A tool to apply a smoothly varying threshold to a nifti image
      hacktoberfest
      JavaScript
      •
      ISC License
      •4•3•3•1•Updated May 3, 2024May 3, 2024

    • eslint-config-naat

      Public
      Style rules for js code at NAAT
      JavaScript
      •2•0•5•0•Updated Apr 1, 2024Apr 1, 2024

    • pli-get

      Public
      Python
      •2•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • reorient

      Public
      A tool for reorienting and cropping MRI data
      hacktoberfest
      JavaScript
      •
      ISC License
      •5•9•0•0•Updated Nov 28, 2023Nov 28, 2023

    • braindev-challenge

      Public
      Data Challenge on neurodevelopmental disorders detection
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Nov 4, 2023Nov 4, 2023

    • cogbases-2023

      Public
      Website for the CogBases workshop - Institut Pasteur, Octobre 2023
      CSS
      •1•0•0•0•Updated Oct 7, 2023Oct 7, 2023

    • microdraw.py

      Public
      Python package for quantitative histology analyses with MicroDraw
      Python
      •2•0•0•0•Updated Oct 3, 2023Oct 3, 2023

    • NeuroWebLab

      Public
      NeuroWebLab backend
      JavaScript
      •1•3•3•2•Updated Aug 8, 2023Aug 8, 2023

    • GWPC

      Public
      Grey-to-White matter Percent Contrast in Autism Spectrum Disorders
      R
      •0•3•0•0•Updated Jun 13, 2023Jun 13, 2023

    • comp-cb-folding

      Public
      Diversity and evolution of cerebellar folding in mammals
      R
      •
      Apache License 2.0
      •0•1•0•0•Updated Feb 13, 2023Feb 13, 2023

    • MeMoDEvo

      Public
      Mechanics, morphogenesis, development & evolution. QBio Symposium 2022
      HTML
      •0•0•0•0•Updated Dec 11, 2022Dec 11, 2022

    • meshgeometry

      Public
      mesh geometry tools
      naat
      C
      •11•2•0•0•Updated Nov 7, 2022Nov 7, 2022

    • marching_cubes

      Public
      A marching cubes implementation, using libigl
      Makefile
      •1•1•0•0•Updated Sep 10, 2022Sep 10, 2022

    • posterwall

      Public
      Code for creating deep zoom poster walls
      Jupyter Notebook
      •1•0•0•0•Updated Jul 12, 2022Jul 12, 2022

    • autism-challenge

      Public
      Data Challenge on Autism Spectrum Disorder detection
      Jupyter Notebook
      •43•3•0•0•Updated Jun 29, 2022Jun 29, 2022

    • brain-covid

      Public
      Vue
      •1•0•0•0•Updated Feb 7, 2022Feb 7, 2022

    • trainable_segmentation

      Public
      A trainable segmentation interface for MicroDraw.
      Python
      •0•0•0•0•Updated Sep 24, 2021Sep 24, 2021

    • brainspell2

      Public
      search engine and collaborative annotation tool for neuroimaging data
      JavaScript
      •0•0•0•0•Updated Aug 27, 2021Aug 27, 2021

    • translucent-viewer

      Public
      A translucent viewer for neuroimaging clusters
      JavaScript
      •2•0•0•0•Updated Aug 27, 2021Aug 27, 2021

    • cmapjs

      Public
      Web-based Coactivation Map browser
      JavaScript
      •1•0•0•0•Updated Aug 23, 2021Aug 23, 2021

    • histology-db

      Public
      Building an online database for storing, curating and sharing metadata and data from diverse collections of histological data.
      0•3•1•0•Updated May 28, 2021May 28, 2021

    • challenge-engine

      Public
      A GitHub based engine to run data challenges with distributed computing and scoring.
      0•0•0•0•Updated Apr 29, 2021Apr 29, 2021

    • NeuroWebLab-app

      Public
      Vue
      •0•0•0•0•Updated Apr 21, 2021Apr 21, 2021

    • NeuroWebLab-server

      Public
      JavaScript
      •0•0•0•0•Updated Apr 21, 2021Apr 21, 2021

    • braincov

      Public
      BrainCov project
      HTML
      •0•0•0•0•Updated Mar 20, 2021Mar 20, 2021