Skip to content

@cmcb-warwick Centre for Mechanochemical Cell Biology

Change the repository type filter

All

    Repositories list

    14 repositories

    • PetaKit5DfromSLD

      Public
      MATLAB
      •
      Other
      •7•0•0•0•Updated Jul 16, 2024Jul 16, 2024

    • Code-for-inferring-macromolecular-architectures

      Public
      Code for Embacher et al, "Bayesian inference of multi-point macromolecular architecture mixtures at nanometre resolution"
      MATLAB
      •
      MIT License
      •1•1•0•0•Updated Sep 12, 2022Sep 12, 2022

    • KiT

      Public
      KiT is a MATLAB program for tracking kinetochores in microscopy movies in 2D or 3D, and in multiple channels.
      MATLAB
      •
      GNU General Public License v3.0
      •5•5•0•0•Updated Jul 7, 2022Jul 7, 2022

    • CellMigration

      Public
      Analysis of cell migration in Igor Pro
      IGOR Pro
      •
      MIT License
      •5•0•0•0•Updated Mar 18, 2022Mar 18, 2022

    • Matlab-app-for-collective-migration-plots-

      Public
      This repository contains files to mount or edit the design and scripts for a matlab app which provides various plots related to collective migration, based on .csv tracks outputted by imaris.
      MATLAB
      •2•0•0•0•Updated Aug 4, 2021Aug 4, 2021

    • KiD-also-known-as-KiT2.1.10-and-BEDCA

      Public
      Subcellular Euclidean distance measurements with Multicolor Fluorescence localization imaging, see Germanova et al., 2021, STAR Protocols
      MATLAB
      •2•0•0•0•Updated Jun 10, 2021Jun 10, 2021

    • myoSPT

      Public
      Python
      •1•0•0•0•Updated Feb 28, 2020Feb 28, 2020

    • protrusion_directions

      Public
      Highly-custom code to calculate the direction of protrusions
      Python
      •0•0•0•0•Updated Aug 23, 2019Aug 23, 2019

    • ImageJ_Macros

      Public
      Assortment of IJ macros developed for various people.
      Python
      •1•0•0•0•Updated Aug 20, 2019Aug 20, 2019

    • spatial-positioning-tiptrack

      Public
      MATLAB
      •0•0•0•0•Updated Oct 19, 2018Oct 19, 2018

    • SiD

      Public
      Spot intensity detection
      MATLAB
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Oct 6, 2017Oct 6, 2017

    • microtubule-directionality

      Public
      MATLAB script to determine microtubule growth orientation
      MATLAB
      •1•0•0•0•Updated Sep 8, 2017Sep 8, 2017

    • persist

      Public
      Computes measures of directional persistence of cell migration
      C
      •0•0•0•0•Updated Sep 8, 2017Sep 8, 2017

    • VolumeFinder

      Public
      Volume analysis of 3D point sets in IgorPro
      HTML
      •
      MIT License
      •1•0•0•0•Updated Mar 9, 2017Mar 9, 2017