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    68 repositories

    • nmdc_microbe

      Public
      This repo is for code involved in working with the NMDC, including metadata submissions
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 7, 2025Mar 7, 2025

    • NEON-IS-data-processing

      Public
      Next generation data processing algorithms and pipeline components for (most) NEON TIS and AIS data products.
      R
      •
      GNU Affero General Public License v3.0
      •8•11•0•2•Updated Mar 6, 2025Mar 6, 2025

    • NEON-IS-avro-schemas

      Public
      Avro schemas used for NEON IS data processing
      GNU General Public License v3.0
      •0•1•0•0•Updated Mar 6, 2025Mar 6, 2025

    • neonPlants

      Public
      Library of R functions to work with NEON plant data
      R
      •
      GNU General Public License v3.0
      •2•4•1•2•Updated Mar 6, 2025Mar 6, 2025

    • portal-core-components

      Public
      Shared Javascript and React Components for the NEON Data Portal front-end
      JavaScript
      •
      MIT License
      •2•6•0•1•Updated Mar 6, 2025Mar 6, 2025

    • NEON-utilities

      Public
      Utilities and scripts for working with NEON data. Currently: an R package with functions to join (stack) the month-by-site files in downloaded NEON data, to convert data to geoCSV format, and to download data from the API.
      R
      •
      GNU Affero General Public License v3.0
      •37•57•9•0•Updated Mar 5, 2025Mar 5, 2025

    • neon-data-api

      Public
      NEON Data API Documentation
      TypeScript
      •
      MIT License
      •3•33•5•6•Updated Mar 4, 2025Mar 4, 2025

    • NEON-geolocation

      Public
      Code package for handling NEON geolocation data. Includes functions to extract spatial data from the API based on a named location, and to calculate more precise locations for select observational data products.
      R
      •
      GNU Affero General Public License v3.0
      •5•22•2•0•Updated Mar 4, 2025Mar 4, 2025

    • NEON-utilities-python

      Public
      Repository for Python package containing data-wrangling utilities for working with NEON data.
      Python
      •
      GNU Affero General Public License v3.0
      •1•3•0•0•Updated Feb 26, 2025Feb 26, 2025

    • phyloNEON

      Public
      A set of tools in R and Python to run phylogenetic and taxonomic analyses on NEON and related data
      R
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Feb 25, 2025Feb 25, 2025

    • portal-react-apps

      Public
      Neonscience.org pages/sections built as React SPAs and managed as Yarn Workspaces
      JavaScript
      •
      MIT License
      •0•4•0•0•Updated Feb 24, 2025Feb 24, 2025

    • NEON-Data-Skills

      Public
      Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:
      pythonrecologydata-skillstutorialneon
      HTML
      •
      GNU Affero General Public License v3.0
      •88•77•11•1•Updated Feb 18, 2025Feb 18, 2025

    • eddy4R

      Public
      R
      •
      GNU Affero General Public License v3.0
      •21•19•2•0•Updated Feb 13, 2025Feb 13, 2025

    • NEON-IS-data-processing-inputs

      Public
      Data and metadata inputs to NEON-IS-data-processing
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • neon-plant-sampling

      Public
      Scripts supporting NEON plant diversity, biomass and productivity sampling
      HTML
      •0•2•0•0•Updated Feb 7, 2025Feb 7, 2025

    • NEON-quick-start-guides

      Public
      Data product info used to generate NEON quick start guides
      R
      •18•0•0•1•Updated Feb 4, 2025Feb 4, 2025

    • NEON-reaeration

      Public
      Repository for a code package that calculates reaeration rate from NEON's Reaeration field and lab collection (DP1.20190.001) data product
      R
      •
      GNU General Public License v3.0
      •10•1•0•0•Updated Jan 6, 2025Jan 6, 2025

    • NEON-IS-DP-analysis

      Public
      R
      •
      GNU Affero General Public License v3.0
      •0•1•0•0•Updated Dec 23, 2024Dec 23, 2024

    • NEON-stream-discharge-NCC189

      Public
      Code and packages for NEON stream discharge calculations. Includes (1) the code package used to generate NEON's Stream discharge rating curve (DP4.00133.001) and Stream discharge (DP4.00130.001) data products and (2) a package for calculating point estimates of discharge from salt injections.
      R
      •
      GNU Affero General Public License v3.0
      •7•0•0•0•Updated Dec 23, 2024Dec 23, 2024

    • earthengine-catalog

      Public
      Earth Engine Public Data Catalog in STAC form
      Jsonnet
      •
      Apache License 2.0
      •71•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • NCAR-NEON

      Public
      Repository for developing code related to NCAR-NEON workshop
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •14•6•8•9•Updated Oct 26, 2024Oct 26, 2024

    • VITALS

      Public
      This repository provides Python Jupyter notebook examples to help users work with VSWIR and TIR data from the EMIT and ECOSTRESS missions.
      Jupyter Notebook
      •
      Apache License 2.0
      •75•0•0•0•Updated Aug 27, 2024Aug 27, 2024

    • NEON-Nitrogen-Transformations

      Public
      Repository for a code package that calculates nitrogen transformation rates from soil nitrogen content measurements, from NEON's Soil inorganic nitrogen pools and transformations (DP1.10080.001) data product
      R
      •
      GNU Affero General Public License v3.0
      •1•1•0•0•Updated Jul 16, 2024Jul 16, 2024

    • legacy_metagenome

      Public
      a repository to update and track issues for NEON legacy metagenome data
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 10, 2024Jul 10, 2024

    • NEON-OS-data-processing

      Public
      Algorithms for processing NEON observational data
      R
      •2•2•1•0•Updated Jun 14, 2024Jun 14, 2024

    • NEON-stream-discharge

      Public
      Code and packages for NEON stream discharge calculations. Includes (1) the code package used to generate NEON's Stream discharge rating curve (DP4.00133.001) and Stream discharge (DP4.00130.001) data products and (2) a package for calculating point estimates of discharge from salt injections.
      R
      •
      GNU Affero General Public License v3.0
      •7•5•0•0•Updated Jun 5, 2024Jun 5, 2024

    • NEON-dissolved-gas

      Public
      Repository for a code package that calculates dissolved gas concentrations from air and equilibrated water data, from NEON's Dissolved gases in surface water (DP1.20097.001) data product.
      R
      •
      GNU Affero General Public License v3.0
      •8•4•8•0•Updated Mar 25, 2024Mar 25, 2024

    • S3-netcdf-python

      Public
      Read / write netCDF files from / to object stores with S3 interface
      Python
      •
      Other
      •10•0•0•0•Updated Nov 29, 2023Nov 29, 2023

    • esa2023-sc11-biodiversity

      Public
      Repository for ESA 2023 Short Course 11 - Explore and Work with Continental-Scale Biodiversity Data: An Introduction to Analysis-Ready NEON and US LTER Data Using Cloud-Native Tools
      R
      •
      GNU Affero General Public License v3.0
      •0•2•0•0•Updated Aug 6, 2023Aug 6, 2023

    • droid

      Public
      DROID (Digital Record and Object Identification)
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •76•0•0•0•Updated Jul 18, 2023Jul 18, 2023