ModuleNotFoundError: No module named 'openalea.maizetrack'

[Illustratien]

Hi,

When I try
(phenotrack) C:\Users\twang\phenotrack3d\examples>python tutorial_leaf_extension.py
I got
ModuleNotFoundError: No module named 'openalea.maizetrack'
I can see maizetrack.py is in the folder of src in this repository but still failed to import.

Any clue?
Thanks.
Tien

[Illustratien]

Update:
I find out this could be due to the error in not able to run python setup.py for path setting.
I run
(phenotrack) C:\Users\twang\phenotrack3d>python setup.py

I got

usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
   or: setup.py --help [cmd1 cmd2 ...]
   or: setup.py --help-commands
   or: setup.py cmd --help

error: no commands supplied

[pradal]

Run python setup.py install or python setup.py develop Le 27/03/2023 à 22:20, Tien-Cheng a écrit :

…

Update: I find out this could be due to the error in not able to run |python setup.py| for path setting. I run |(phenotrack) C:\Users\twang\phenotrack3d>python setup.py| I got |usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] or: setup.py --help [cmd1 cmd2 ...] or: setup.py --help-commands or: setup.py cmd --help error: no commands supplied | — Reply to this email directly, view it on GitHub <#6 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAIR4STZOWI7D4VL7EJYEYDW6HZBPANCNFSM6AAAAAAWJS5SQ4>. You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[Illustratien]

Thanks @pradal.

Now after installing setyp.py

Maybe alinea is also required to be install when create the conda environment?

Traceback (most recent call last):
  File "examples/tutorial_leaf_extension.py", line 8, in <module>
    from openalea.maizetrack.leaf_extension import leaf_extension
  File "c:\users\twang\appdata\local\r-miniconda\envs\phenotrack\lib\site-packages\openalea.maizetrack-0.1.3-py3.8.egg\openalea\maizetrack\leaf_extension.py", line 20, in <module>
    from openalea.maizetrack.utils import phm3d_to_px2d
  File "c:\users\twang\appdata\local\r-miniconda\envs\phenotrack\lib\site-packages\openalea.maizetrack-0.1.3-py3.8.egg\openalea\maizetrack\utils.py", line 6, in <module>
    from alinea.phenoarch.shooting_frame import get_shooting_frame
ModuleNotFoundError: No module named 'alinea'

[Illustratien]

I try with this command to install alinea
(phenotrack) C:\Users\twang\phenotrack3d>conda install -c openalea alinea.astk
but failed.

Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: -
Found conflicts! Looking for incompatible packages.
This can take several minutes.  Press CTRL-C to abort.
failed

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

[pradal]

No. This is an error.
alinea.phenoarchis an internal package