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chore(rebuild): Merge pull request #287 from joshmoore/0_5_1
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SHA: 5ecd837
Reason: push, by @joshmoore

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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6 changes: 3 additions & 3 deletions 0.1/index.html
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<meta content="Bikeshed version ac5ea272d, updated Fri Dec 6 15:45:15 2024 -0800" name="generator">
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<div class="head">
<img alt="OME logo (6 circles in a hexagon)" src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2024-12-17">17 December 2024</time></span></h2>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2025-01-11">11 January 2025</time></span></h2>
<div data-fill-with="spec-metadata">
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<dt>This version:
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<div data-fill-with="warning"></div>
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2024 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2025 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
OME trademark rules apply. </p>
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<meta content="Bikeshed version ac5ea272d, updated Fri Dec 6 15:45:15 2024 -0800" name="generator">
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<div class="head">
<img alt="OME logo (6 circles in a hexagon)" src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2024-12-17">17 December 2024</time></span></h2>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2025-01-11">11 January 2025</time></span></h2>
<div data-fill-with="spec-metadata">
<dl>
<dt>This version:
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</dl>
</div>
<div data-fill-with="warning"></div>
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2024 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2025 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
OME trademark rules apply. </p>
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<meta content="Bikeshed version ac5ea272d, updated Fri Dec 6 15:45:15 2024 -0800" name="generator">
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<div class="head">
<img alt="OME logo (6 circles in a hexagon)" src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2024-12-17">17 December 2024</time></span></h2>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2025-01-11">11 January 2025</time></span></h2>
<div data-fill-with="spec-metadata">
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<dt>This version:
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</dl>
</div>
<div data-fill-with="warning"></div>
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2024 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2025 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
OME trademark rules apply. </p>
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<meta content="Bikeshed version ac5ea272d, updated Fri Dec 6 15:45:15 2024 -0800" name="generator">
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<div class="head">
<img alt="OME logo (6 circles in a hexagon)" src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2024-12-17">17 December 2024</time></span></h2>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2025-01-11">11 January 2025</time></span></h2>
<div data-fill-with="spec-metadata">
<dl>
<dt>This version:
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</dl>
</div>
<div data-fill-with="warning"></div>
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2024 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2025 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
OME trademark rules apply. </p>
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<meta content="Bikeshed version ac5ea272d, updated Fri Dec 6 15:45:15 2024 -0800" name="generator">
<link href="https://ngff.openmicroscopy.org/0.5/" rel="canonical">
<link href="https://www.w3.org/2008/site/images/favicon.ico" rel="icon">
<meta content="54b146f7f6a0f2f1be5e1dda20ffe2dfdfa7d7c8" name="revision">
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<div class="head">
<img alt="OME logo (6 circles in a hexagon)" src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
<h1 class="p-name no-ref" id="title">OME-Zarr specification</h1>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2024-12-17">17 December 2024</time></span></h2>
<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2025-01-11">11 January 2025</time></span></h2>
<div data-fill-with="spec-metadata">
<dl>
<dt>This version:
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</dl>
</div>
<div data-fill-with="warning"></div>
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2024 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
<p class="copyright" data-fill-with="copyright">Copyright © 2020-2025 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
OME trademark rules apply. </p>
<hr title="Separator for header">
</div>
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<c- p>}</c->
</pre>
<p>See the <a href="https://omero.readthedocs.io/en/stable/developers/Web/WebGateway.html#imgdata">OMERO WebGateway documentation</a> for more information.</p>
<p>The "omero" metadata is optional, but if present it MUST contain the field "channels", which is an array of dictionaries describing the channels of the image.
Each dictionary in "channels" MUST contain the field "color", which is a string of 6 hexadecimal digits specifying the color of the channel in RGB format.
Each dictionary in "channels" MUST contain the field "window", which is a dictionary describing the windowing of the channel.
The field "window" MUST contain the fields "min" and "max", which are the minimum and maximum values of the window, respectively.
It MUST also contain the fields "start" and "end", which are the start and end values of the window, respectively.</p>
<h3 class="heading settled" data-level="2.6" id="labels-md"><span class="secno">2.6. </span><span class="content">"labels" metadata</span><a class="self-link" href="#labels-md"></a></h3>
<p>In OME-Zarr, Zarr arrays representing pixel-annotation data are stored in a group called "labels". Some applications--notably image segmentation--produce
a new image that is in the same coordinate system as a corresponding multiscale image (usually having the same dimensions and coordinate transformations).
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<td>Description
<tbody>
<tr>
<td>0.5
<td>0.5.1
<td>2025-01-10
<td>Re-add the improved omero description in PR-191.
<tr>
<td>0.5.0
<td>2024-11-21
<td>use Zarr v3 in OME-Zarr, see <a href="https://ngff.openmicroscopy.org/rfc/2">RFC-2</a>.
<tr>
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