Skip to content

Commit

Permalink
Merge pull request #293 from will-moore/dimension_names_required
Browse files Browse the repository at this point in the history
  • Loading branch information
joshmoore authored Jan 28, 2025
2 parents a2c2c4d + cabc190 commit 5cdf83b
Show file tree
Hide file tree
Showing 10 changed files with 15 additions and 25 deletions.
5 changes: 1 addition & 4 deletions 0.1/header.include
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,7 @@
<body class="h-entry">
<div class="head">

<!--p data-fill-with="logo"></p-->
<img src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg"
alt="OME logo (6 circles in a hexagon)"
style="float:right;width:42px;height:42px;">
<img src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg" alt="OME logo (6 circles in a hexagon)" style="float:right;width:42px;height:42px;">

<h1 id="title" class="p-name no-ref">[TITLE]</h1>
<h2 id="subtitle" class="no-num no-toc no-ref">[LONGSTATUS],
Expand Down
2 changes: 1 addition & 1 deletion 0.1/index.bs
Original file line number Diff line number Diff line change
Expand Up @@ -500,7 +500,7 @@ Projects which support reading and/or writing OME-NGFF data include:

</dl>

<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects"></img>
<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects">

All implementations prevent an equivalent representation of a dataset which can be downloaded or uploaded freely. An interactive
version of this diagram is available from the [OME2020 Workshop](https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/).
Expand Down
5 changes: 1 addition & 4 deletions 0.2/header.include
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,7 @@
<body class="h-entry">
<div class="head">

<!--p data-fill-with="logo"></p-->
<img src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg"
alt="OME logo (6 circles in a hexagon)"
style="float:right;width:42px;height:42px;">
<img src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg" alt="OME logo (6 circles in a hexagon)" style="float:right;width:42px;height:42px;">

<h1 id="title" class="p-name no-ref">[TITLE]</h1>
<h2 id="subtitle" class="no-num no-toc no-ref">[LONGSTATUS],
Expand Down
2 changes: 1 addition & 1 deletion 0.2/index.bs
Original file line number Diff line number Diff line change
Expand Up @@ -558,7 +558,7 @@ Projects which support reading and/or writing OME-NGFF data include:

</dl>

<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects"></img>
<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects">

All implementations prevent an equivalent representation of a dataset which can be downloaded or uploaded freely. An interactive
version of this diagram is available from the [OME2020 Workshop](https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/).
Expand Down
5 changes: 1 addition & 4 deletions 0.3/header.include
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,7 @@
<body class="h-entry">
<div class="head">

<!--p data-fill-with="logo"></p-->
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg"
alt="OME logo (6 circles in a hexagon)"
style="float:right;width:42px;height:42px;">
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" alt="OME logo (6 circles in a hexagon)" style="float:right;width:42px;height:42px;">

<h1 id="title" class="p-name no-ref">[TITLE]</h1>
<h2 id="subtitle" class="no-num no-toc no-ref">[LONGSTATUS],
Expand Down
2 changes: 1 addition & 1 deletion 0.3/index.bs
Original file line number Diff line number Diff line change
Expand Up @@ -568,7 +568,7 @@ Projects which support reading and/or writing OME-NGFF data include:

</dl>

<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects"></img>
<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects">

All implementations prevent an equivalent representation of a dataset which can be downloaded or uploaded freely. An interactive
version of this diagram is available from the [OME2020 Workshop](https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/).
Expand Down
5 changes: 1 addition & 4 deletions 0.4/header.include
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,7 @@
<body class="h-entry">
<div class="head">

<!--p data-fill-with="logo"></p-->
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg"
alt="OME logo (6 circles in a hexagon)"
style="float:right;width:42px;height:42px;">
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" alt="OME logo (6 circles in a hexagon)" style="float:right;width:42px;height:42px;">

<h1 id="title" class="p-name no-ref">[TITLE]</h1>
<h2 id="subtitle" class="no-num no-toc no-ref">[LONGSTATUS],
Expand Down
2 changes: 1 addition & 1 deletion 0.4/index.bs
Original file line number Diff line number Diff line change
Expand Up @@ -643,7 +643,7 @@ Projects which support reading and/or writing OME-NGFF data include:

</dl>

<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects"></img>
<img src="https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/images/zarr-ome-diagram.png" alt="Diagram of related projects">

All implementations prevent an equivalent representation of a dataset which can be downloaded or uploaded freely. An interactive
version of this diagram is available from the [OME2020 Workshop](https://downloads.openmicroscopy.org/presentations/2020/Dundee/Workshops/NGFF/zarr_diagram/).
Expand Down
5 changes: 1 addition & 4 deletions 0.5/header.include
Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,7 @@
<body class="h-entry">
<div class="head">

<!--p data-fill-with="logo"></p-->
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg"
alt="OME logo (6 circles in a hexagon)"
style="float:right;width:42px;height:42px;">
<img src="https://www.openmicroscopy.org/img/logos/ome-logomark.svg" alt="OME logo (6 circles in a hexagon)" style="float:right;width:42px;height:42px;">

<h1 id="title" class="p-name no-ref">[TITLE]</h1>
<h2 id="subtitle" class="no-num no-toc no-ref">[LONGSTATUS],
Expand Down
7 changes: 6 additions & 1 deletion 0.5/index.bs
Original file line number Diff line number Diff line change
Expand Up @@ -188,7 +188,7 @@ The OME-Zarr Metadata version MUST be consistent within a hierarchy.

The "axes" are used as part of [[#multiscale-md]]. The length of "axes" MUST be equal to the number of dimensions of the arrays that contain the image data.

The "dimension_names" attribute in the `zarr.json` of the Zarr array of a multiscale level, if defined, MUST match the names in the "axes" metadata.
The "dimension_names" attribute MUST be included in the `zarr.json` of the Zarr array of a multiscale level and MUST match the names in the "axes" metadata.


"bioformats2raw.layout" (transitional) {#bf2raw}
Expand Down Expand Up @@ -595,6 +595,11 @@ Version History {#history}
<td>Description</td>
</tr>
</thead>
<tr>
<td>0.5.2</td>
<td>2025-01-10</td>
<td>Clarify that the <code>dimension_names</code> field in <code>axes</code> MUST be included.</td>
</tr>
<tr>
<td>0.5.1</td>
<td>2025-01-10</td>
Expand Down

0 comments on commit 5cdf83b

Please sign in to comment.