STY: Apply ruff/flake8-pie rules (PIE)

[DimitriPapadopoulos]

Summary

Apply flake8-pie (PIE) rules, except:

• PIE794 (doesn't help here)

[codecov]

Codecov Report

Attention: Patch coverage is 20.00000% with 12 lines in your changes missing coverage. Please review.

Project coverage is 70.84%. Comparing base (e03ab6f) to head (3980037).
Report is 176 commits behind head on master.

Files with missing lines	Patch %	Lines
nipype/interfaces/cmtk/cmtk.py	0.00%	2 Missing ⚠️
nipype/interfaces/dcm2nii.py	0.00%	2 Missing ⚠️
nipype/algorithms/misc.py	0.00%	1 Missing ⚠️
nipype/interfaces/cmtk/nx.py	0.00%	1 Missing ⚠️
nipype/interfaces/dipy/simulate.py	0.00%	1 Missing ⚠️
nipype/interfaces/freesurfer/preprocess.py	0.00%	1 Missing ⚠️
nipype/interfaces/freesurfer/utils.py	0.00%	0 Missing and 1 partial ⚠️
...ne/plugins/tests/test_legacymultiproc_nondaemon.py	0.00%	1 Missing ⚠️
nipype/utils/filemanip.py	0.00%	1 Missing ⚠️
nipype/utils/nipype2boutiques.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@           Coverage Diff           @@
##           master    #3678   +/-   ##
=======================================
  Coverage   70.83%   70.84%           
=======================================
  Files        1276     1276           
  Lines       59320    59313    -7     
  Branches     9826     9826           
=======================================
- Hits        42019    42018    -1     
+ Misses      16125    16119    -6     
  Partials     1176     1176           

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