Update change tags

nf-core · Sep 18, 2023 · 8284cc4 · 8284cc4
1 parent 3256120
commit 8284cc4
Showing 1 changed file with 48 additions and 56 deletions.
diff --git a/.github/tags.yml b/.github/tags.yml
@@ -14,74 +14,66 @@ sra_to_samplesheet:
 
 # workflow: sra
 sra_custom_ena_metadata_fields:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test
 sra_default_parameters:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_default_parameters.nf.test
 sra_force_sratools_download:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_force_sratools_download.nf.test
 sra_nf_core_pipeline_atacseq:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test
 sra_nf_core_pipeline_rnaseq:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test
 sra_nf_core_pipeline_taxprofiler:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test
 sra_nf_core_pipeline_viralrecon:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test
 sra_skip_fastq_download:
-  - conf/modules/sra.config
-  - modules/local/sra_ids_to_runinfo/main.nf
-  - modules/local/sra_runinfo_to_ftp/main.nf
-  - modules/local/sra_fastq_ftp/main.nf
-  - modules/local/sra_to_samplesheet/main.nf
-  - modules/local/sra_merge_samplesheet/main.nf
-  - workflows/sra/main.nf
+  - modules/local/sra_ids_to_runinfo/*
+  - modules/local/sra_runinfo_to_ftp/*
+  - modules/local/sra_fastq_ftp/*
+  - modules/local/sra_to_samplesheet/*
+  - modules/local/sra_merge_samplesheet/*
+  - workflows/sra/*
   - workflows/sra/tests/sra_skip_fastq_download.nf.test