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Bump mafft version to v7.520
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We were using v7.475 (~2.5y old) which had serious bug
occasionally requesting excessive memory
See https://mafft.cbrc.jp/alignment/software/changelog.html
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corneliusroemer committed May 4, 2023
1 parent a8a159f commit 96ac3e8
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3 changes: 2 additions & 1 deletion Dockerfile
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Expand Up @@ -89,8 +89,9 @@ RUN curl -fsSL https://github.com/vcftools/vcftools/releases/download/v0.1.16/vc
# NOTE: Running this program requires support for emulation on the Docker host
# if the processor architecture is not amd64.
# TODO: Build from source to avoid emulation. Instructions: https://mafft.cbrc.jp/alignment/software/installation_without_root.html
# Last update: 2023-05-03 to v7.520 from v7.475 (~end of 2020)
WORKDIR /download/mafft
RUN curl -fsSL https://mafft.cbrc.jp/alignment/software/mafft-7.475-linux.tgz \
RUN curl -fsSL https://mafft.cbrc.jp/alignment/software/mafft-7.520-linux.tgz \
| tar xzvpf - --no-same-owner --strip-components=2 mafft-linux64/mafftdir/ \
&& cp -p bin/* /final/bin \
&& cp -p libexec/* /final/libexec
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