update version

ncbi · Aug 26, 2022 · ce3b472 · ce3b472
1 parent 5adc3f9
commit ce3b472
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/dist/run_fcsadaptor.sh b/dist/run_fcsadaptor.sh
@@ -1,7 +1,7 @@
 #!/bin/bash
 
 SCRIPT_NAME=$0
-DEFAULT_VERSION="0.2.1"
+DEFAULT_VERSION="0.2.3"
 DOCKER_IMAGE=ncbi/fcs-adaptor:${DEFAULT_VERSION}
 SINGULARITY_IMAGE=""
 CONTAINER_ENGINE="docker"

diff --git a/dist/run_fcsgx.py b/dist/run_fcsgx.py
@@ -13,7 +13,7 @@
 
 CONTAINER = "run_gx"
 DEFAULT_CONTAINER_DB = "/app/db/gxdb"
-DEFAULT_VERSION = "0.2.1"
+DEFAULT_VERSION = "0.2.3"
 DEFAULT_DOCKER_IMAGE = f"ncbi/fcs-gx:{DEFAULT_VERSION}"
 DEFAULT_SINGULARITY_IMAGE = f"fcs-gx.{DEFAULT_VERSION}.sif"
 # FILE_MANIFEST = "sing-image.manifest"
@@ -95,7 +95,8 @@ def run_retrieve_db(self):
             extra_docker_args = [mount_arg, str(expanded_gxdb_disk) + ":/db-disk-volume/"]
             extra_db_args = ["--gx-db-disk", "/db-disk-volume/"]
 
-        extra_docker_args.extend(["--tty"])
+        if container_engine == "docker":
+            extra_docker_args.extend(["--tty"])
 
         retrieve_db_args = [
             container_engine,