MAINT: Include mamba in env

mne-tools · Feb 13, 2023 · afac4dd · afac4dd
1 parent ae7ecf8
commit afac4dd
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Showing 6 changed files with 13 additions and 1 deletion.
diff --git a/.github/workflows/compat_minimal.yml b/.github/workflows/compat_minimal.yml
@@ -38,6 +38,8 @@ jobs:
       - uses: conda-incubator/setup-miniconda@v2
         with:
           python-version: ${{ env.PYTHON_VERSION }}
+          mamba-version: "*"
+          use-mamba: true
         name: 'Setup conda'
       - shell: bash -el {0}
         run: |

diff --git a/.github/workflows/compat_old.yml b/.github/workflows/compat_old.yml
@@ -32,6 +32,8 @@ jobs:
       - uses: conda-incubator/setup-miniconda@v2
         with:
           python-version: ${{ env.PYTHON_VERSION }}
+          mamba-version: "*"
+          use-mamba: true
         name: 'Setup conda'
       - shell: bash -el {0}
         run: |

diff --git a/.github/workflows/linux_conda.yml b/.github/workflows/linux_conda.yml
@@ -33,6 +33,9 @@ jobs:
           activate-environment: 'mne'
           python-version: ${{ env.PYTHON_VERSION }}
           environment-file: ${{ env.CONDA_ENV }}
+          # No mamba for this one job (use conda)
+          # mamba-version: "*"
+          # use-mamba: true
         name: 'Setup conda'
       - shell: bash -el {0}
         run: |
@@ -89,6 +92,8 @@ jobs:
           activate-environment: 'mne'
           python-version: ${{ env.PYTHON_VERSION }}
           environment-file: ${{ env.CONDA_ENV }}
+          mamba-version: "*"
+          use-mamba: true
         name: 'Setup conda'
       - shell: bash -el {0}
         run: |

diff --git a/.github/workflows/macos_conda.yml b/.github/workflows/macos_conda.yml
@@ -32,6 +32,8 @@ jobs:
           activate-environment: 'mne'
           python-version: ${{ env.PYTHON_VERSION }}
           environment-file: ${{ env.CONDA_ENV }}
+          mamba-version: "*"
+          use-mamba: true
         name: 'Setup conda'
       - shell: bash -el {0}
         run: |

diff --git a/environment.yml b/environment.yml
@@ -55,3 +55,4 @@ dependencies:
 - eeglabio
 - edflib-python
 - pybv
+- mamba
diff --git a/tools/github_actions_dependencies.sh b/tools/github_actions_dependencies.sh
@@ -5,7 +5,7 @@ EXTRA_ARGS=""
 if [ ! -z "$CONDA_ENV" ]; then
 	pip uninstall -yq mne
 elif [ ! -z "$CONDA_DEPENDENCIES" ]; then
-	conda install -y $CONDA_DEPENDENCIES
+	mamba install -y $CONDA_DEPENDENCIES
 else
 	# Changes here should also go in the interactive_test CircleCI job
 	python -m pip install $STD_ARGS pip setuptools wheel
-Original file line number
+Diff line change
@@ Expand Up / @@ -55,3 +55,4 @@ dependencies: @@
     - eeglabio
     - edflib-python
     - pybv
+    - mamba