missing pytest packages

.pre-commit-config.yaml

@@ -49,27 +49,27 @@ repos:
         additional_dependencies: [pyyaml]
 
   - repo: https://github.com/adamchainz/blacken-docs
-    rev: "1.16.0"
+    rev: 1.16.0
     hooks:
       - id: blacken-docs
         additional_dependencies: [black==23.*]
 
   - repo: https://github.com/pre-commit/mirrors-prettier
-    rev: "v3.1.0"
+    rev: v3.1.0
     hooks:
       - id: prettier
-        types_or: [yaml, markdown, html, css, scss, javascript, json]
+        types_or: [yaml, toml, markdown, html, css, scss, javascript, json]
         args: [--prose-wrap=always]
 
   - repo: https://github.com/codespell-project/codespell
-    rev: "v2.2.6"
+    rev: v2.2.6
     hooks:
       - id: codespell
         exclude: ^Gemfile\.lock$
-        args: ["-Lnd", "-w"]
+        args: [-Lnd, -w]
 
   - repo: https://github.com/pre-commit/pygrep-hooks
-    rev: "v1.10.0"
+    rev: v1.10.0
     hooks:
       - id: rst-backticks
       - id: rst-directive-colons

README.md

@@ -1,8 +1,8 @@
 # Geant4 Python Application
 
 [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/lobis/geant4-python-application/HEAD)
-[![Build and Test](https://github.com/lobis/geant4-python-application/actions/workflows/build-test.yml/badge.svg)](https://github.com/lobis/geant4-python-application/actions/workflows/test.yml)
-[![Docker Image](https://github.com/lobis/geant4-python-application/actions/workflows/docker.yml/badge.svg)](https://github.com/lobis/geant4-python-application/actions/workflows/docker.yml)
+[![Build and Test](https://github.com/lobis/geant4-python-application/actions/workflows/build-test.yaml/badge.svg)](https://github.com/lobis/geant4-python-application/actions/workflows/test.yaml)
+[![Docker Image](https://github.com/lobis/geant4-python-application/actions/workflows/docker.yaml/badge.svg)](https://github.com/lobis/geant4-python-application/actions/workflows/docker.yaml)
 
 ```python
 from geant4_python_application import Application, basic_gdml

pyproject.toml

@@ -3,51 +3,54 @@ build-backend = "scikit_build_core.build"
 requires = ["scikit-build-core>=0.3.3", "pybind11"]
 
 [project]
-version = "0.0.1"
-name = "geant4_python_application"
-description = "Geant4 Python Application"
-readme = "README.md"
-requires-python = ">=3.9"
-
 authors = [
-    {name = "Luis Antonio Obis Aparicio", email = "[email protected]"},
+  {name = "Luis Antonio Obis Aparicio", email = "[email protected]"}
 ]
 classifiers = [
-    "Intended Audience :: Developers",
-    "Intended Audience :: Information Technology",
-    "Intended Audience :: Science/Research",
-    "License :: OSI Approved :: BSD License",
-    "Operating System :: MacOS",
-    "Operating System :: POSIX",
-    "Operating System :: Unix",
-    "Programming Language :: Python",
-    "Programming Language :: Python :: 3",
-    "Programming Language :: Python :: 3 :: Only",
-    "Programming Language :: Python :: 3.9",
-    "Programming Language :: Python :: 3.10",
-    "Programming Language :: Python :: 3.11",
-    "Programming Language :: Python :: 3.12",
-    "Topic :: Scientific/Engineering",
-    "Topic :: Scientific/Engineering :: Information Analysis",
-    "Topic :: Scientific/Engineering :: Mathematics",
-    "Topic :: Scientific/Engineering :: Physics",
-    "Topic :: Software Development",
-    "Topic :: Utilities"
+  "Intended Audience :: Developers",
+  "Intended Audience :: Information Technology",
+  "Intended Audience :: Science/Research",
+  "License :: OSI Approved :: BSD License",
+  "Operating System :: MacOS",
+  "Operating System :: POSIX",
+  "Operating System :: Unix",
+  "Programming Language :: Python",
+  "Programming Language :: Python :: 3",
+  "Programming Language :: Python :: 3 :: Only",
+  "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: 3.12",
+  "Topic :: Scientific/Engineering",
+  "Topic :: Scientific/Engineering :: Information Analysis",
+  "Topic :: Scientific/Engineering :: Mathematics",
+  "Topic :: Scientific/Engineering :: Physics",
+  "Topic :: Software Development",
+  "Topic :: Utilities"
 ]
-
 dependencies = [
-    "awkward",
-    "numpy",
+  "awkward",
+  "numpy"
 ]
+description = "Geant4 Python Application"
+name = "geant4_python_application"
+readme = "README.md"
+requires-python = ">=3.9"
+version = "0.0.1"
 
 [project.optional-dependencies]
 dev = [
-    "boost_histogram",
-    "hist",
-    "pandas",
-    "awkward-pandas"
+  "boost_histogram",
+  "hist",
+  "pandas",
+  "awkward-pandas"
+]
+test = [
+  "pytest",
+  "pytest-xdist",
+  "pytest-timeout",
+  "pytest-rerunfailures"
 ]
-test = ["pytest"]
 
 [tool.cibuildwheel]
 build-verbosity = 1
@@ -58,7 +61,7 @@ test-skip = ["*universal2:arm64"]
 [tool.pytest.ini_options]
 addopts = ["-ra", "--showlocals", "--strict-markers", "--strict-config"]
 filterwarnings = [
-    "error"
+  "error"
 ]
 log_cli_level = "INFO"
 minversion = "6.0"
@@ -70,31 +73,31 @@ src = ["src"]
 
 [tool.ruff.lint]
 extend-select = [
-    "B", # flake8-bugbear
-    "I", # isort
-    "ARG", # flake8-unused-arguments
-    "C4", # flake8-comprehensions
-    "EM", # flake8-errmsg
-    "ICN", # flake8-import-conventions
-    "G", # flake8-logging-format
-    "PGH", # pygrep-hooks
-    "PIE", # flake8-pie
-    "PL", # pylint
-    "PT", # flake8-pytest-style
-    "PTH", # flake8-use-pathlib
-    "RET", # flake8-return
-    "RUF", # Ruff-specific
-    "SIM", # flake8-simplify
-    "T20", # flake8-print
-    "UP", # pyupgrade
-    "YTT", # flake8-2020
-    "EXE", # flake8-executable
-    "NPY", # NumPy specific rules
-    "PD"  # pandas-vet
+  "B",  # flake8-bugbear
+  "I",  # isort
+  "ARG",  # flake8-unused-arguments
+  "C4",  # flake8-comprehensions
+  "EM",  # flake8-errmsg
+  "ICN",  # flake8-import-conventions
+  "G",  # flake8-logging-format
+  "PGH",  # pygrep-hooks
+  "PIE",  # flake8-pie
+  "PL",  # pylint
+  "PT",  # flake8-pytest-style
+  "PTH",  # flake8-use-pathlib
+  "RET",  # flake8-return
+  "RUF",  # Ruff-specific
+  "SIM",  # flake8-simplify
+  "T20",  # flake8-print
+  "UP",  # pyupgrade
+  "YTT",  # flake8-2020
+  "EXE",  # flake8-executable
+  "NPY",  # NumPy specific rules
+  "PD"  # pandas-vet
 ]
 ignore = [
-    "PLR09", # Too many X
-    "PLR2004"  # Magic comparison
+  "PLR09",  # Too many X
+  "PLR2004"  # Magic comparison
 ]
 isort.required-imports = ["from __future__ import annotations"]