Skip to content

Commit

Permalink
Removed pre-emptive docker rmi from CI
Browse files Browse the repository at this point in the history
  • Loading branch information
ArtemSokolov committed Jan 30, 2025
1 parent 4efd79f commit 2498c7e
Showing 1 changed file with 0 additions and 3 deletions.
3 changes: 0 additions & 3 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -108,7 +108,6 @@ jobs:
run: mv ~/data/af/exemplar-001 ~/data
- name: Test exemplar-001 with additional parameters
run: |
docker rmi -f $(docker images -a -q)
./nextflow main.nf --in ~/data/exemplar-001 ${{ matrix.params }}
ls -R ~/data/exemplar-001
- name: Upload processed result
Expand Down Expand Up @@ -136,7 +135,6 @@ jobs:
key: ex001-2022-02-24
- name: Test exemplar-001 step-by-step
run: |
docker rmi -f $(docker images -a -q)
./nextflow main.nf --in ~/data/exemplar-001 --start-at registration --stop-at registration
./nextflow clean -f last
./nextflow main.nf --in ~/data/exemplar-001 --start-at segmentation --stop-at segmentation
Expand Down Expand Up @@ -165,7 +163,6 @@ jobs:
key: ex002-2022-02-24
- name: Test exemplar-002
run: |
docker rmi -f $(docker images -a -q)
./nextflow main.nf --in ~/data/exemplar-002 --tma --start-at registration --stop-at segmentation --segmentation mesmer
docker rmi -f $(docker images -a -q)
./nextflow main.nf --in ~/data/exemplar-002 --tma --start-at quantification
Expand Down

0 comments on commit 2498c7e

Please sign in to comment.