Merge pull request #98 from jjmccollum/97-positive-proportionsproport… #433
Workflow file for this run
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| name: stemma | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install poetry | |
| run: pipx install poetry | |
| - name: Install dependencies for Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'poetry' | |
| - run: poetry install | |
| - name: Testing | |
| run: | | |
| poetry run teiphy -t reconstructed -t defective -t orthographic -m overlap -m lac -s"*" -s T --fill-correctors --format stemma example/ubs_ephesians.xml stemma_example | |
| - name: Install Phylogenetics Packages | |
| run: | | |
| sudo mkdir /root/bin | |
| git clone https://github.com/stemmatic/prep.git | |
| cd prep | |
| sudo make | |
| cd .. | |
| git clone https://github.com/stemmatic/stemma.git | |
| cd stemma | |
| sudo make | |
| - name: Phylogenetics Run | |
| run: | | |
| sudo /root/bin/prep stemma_example | |
| sudo /root/bin/stemma stemma_example a 100 | |
| sudo /root/bin/soln stemma_example SOLN |