update cime submodule

.gitmodules

@@ -31,7 +31,7 @@
 	path = cime
 	url = https://github.com/jedwards4b/cime
         fxrequired = T:T
-        fxtag = cime6.0.198_rme02
+        fxtag = cime6.0.198_rme04
 
 [submodule "cmeps"]
 	path = components/cmeps

install

@@ -1,64 +1,43 @@
 #!/bin/bash
-# Script to fetch submodules for CTSM
-# if argument -internal-only is supplied then only checkout CTSM internal submodules, otherwise checkout everything needed for
-# CTSM as a top level repository
+#
+# Script to fetch submodules for NCAR EARTH SYSTEM MODELS
 #
 set -e
-script="install"
-function usage {
-    echo -e "\nusage: $script [-i/--internal-only]\n"
-}
-# Set default arguments
-internal_only=0
 
-# Process arguments
-while [ "$1" != "" ];
-do
-    case $1 in
+function version { echo "$@" | awk -F. '{ printf("%d%03d%03d%03d\n", $1,$2,$3,$4); }'; }
 
-        # Only checkout CISM internal submodules
-        -i | -internal-only | --internal-only)
-            internal_only=1
-            ;;
 
-        *)
-            echo "$script: illegal option $1"
-            usage
-            exit 1
-            ;;
-    esac
-    shift
-done
+# Function to install git-fleximod (uncomment only one option)
+function install_git_fleximod() {
+    # -- Option 1: Install from PyPI using pip
+    pip install fleximod
+    # -- Option 2: Install from conda-forge using conda
+    # conda install -c conda-forge git-fleximod
+    # -- Option 3: Install from GitHub (adjust URL and path if needed)
+    # git clone https://github.com/jedwards4b/git-fleximod.git
+    # cd git-fleximod
+    # pip install
+}                                                                  
 
 ########################
-
-submodules=('src/fates')
-
-for mod in "${submodules[@]}"
-do
-    echo "Initializing $mod"
-    git submodule update --init $mod
-done
-
-if [ ${internal_only} -eq 1 ]
-  then
-    exit 0
+dir=$(git rev-parse --show-toplevel)
+
+# Check if git-fleximod is in the path and get its version
+if command -v git-fleximod >/dev/null 2>&1; then
+    gfversion=$(git-fleximod --version)
+    echo "git-fleximod version: $version"
+    # Check if the version is acceptable (adjust the logic as needed)
+
+    if [ $(version $gfversion) -ge $(version "0.1.7") ]; then
+      echo "git-fleximod is already installed and at an acceptable version."
+    else
+      echo "Installed git-fleximod version is too old. Updating..."
+      install_git_fleximod  # Call the install function
+    fi
+else
+    echo "git-fleximod is not installed. Installing..."
+    install_git_fleximod  # Call the install function
 fi
-
-
-extra_submodules=('cime' 'components/rtm' 'components/mosart' \
-           'components/mizuRoute' 'ccs_config' 'components/cmeps' \
-           'components/cdeps' 'components/cpl7' 'share' 'libraries/mct' \
-           'libraries/parallelio' 'doc/doc-builder')
-
-for mod in "${extra_submodules[@]}"
-do
-    echo "Initializing $mod"
-    git submodule update --init --recursive $mod
-done                        
-
-# cism needs special handling
-git submodule update --init components/cism
-pushd components/cism 1>/dev/null
-./install -internal-only
+pushd ${dir} 1>/dev/null
+git fleximod install "$@"
 popd 1>/dev/null