Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Developer #235

Merged
merged 2 commits into from
Aug 14, 2022
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Binary file modified docs/_build/doctrees/environment.pickle
Binary file not shown.
Binary file modified docs/_build/doctrees/index.doctree
Binary file not shown.
2 changes: 1 addition & 1 deletion docs/_build/html/.buildinfo
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: d7d8db5202111ae4eeb42e502c13babb
config: c2e58b712235d3560567310ce66d08a6
tags: 645f666f9bcd5a90fca523b33c5a78b7
7 changes: 4 additions & 3 deletions docs/_build/html/_modules/index.html
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
Expand All @@ -11,6 +11,7 @@
<script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js"></script>
<script src="../_static/jquery.js"></script>
<script src="../_static/underscore.js"></script>
<script src="../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../_static/doctools.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
Expand Down Expand Up @@ -67,7 +68,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -87,7 +88,7 @@ <h3>Navigation</h3>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
13 changes: 7 additions & 6 deletions docs/_build/html/_modules/tigramite/causal_effects.html
Original file line number Diff line number Diff line change
@@ -1,16 +1,17 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>tigramite.causal_effects &#8212; Tigramite 5.0 documentation</title>
<title>tigramite.causal_effects &#8212; Tigramite 5.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../_static/sphinxdoc.css" />
<script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js"></script>
<script src="../../_static/jquery.js"></script>
<script src="../../_static/underscore.js"></script>
<script src="../../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../../_static/doctools.js"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
Expand All @@ -24,7 +25,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.causal_effects</a></li>
</ul>
Expand Down Expand Up @@ -2695,7 +2696,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -2709,14 +2710,14 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.causal_effects</a></li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
7 changes: 4 additions & 3 deletions docs/_build/html/_modules/tigramite/data_processing.html
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
Expand All @@ -11,6 +11,7 @@
<script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js"></script>
<script src="../../_static/jquery.js"></script>
<script src="../../_static/underscore.js"></script>
<script src="../../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../../_static/doctools.js"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
Expand Down Expand Up @@ -1426,7 +1427,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -1447,7 +1448,7 @@ <h3>Navigation</h3>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
Original file line number Diff line number Diff line change
@@ -1,16 +1,17 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>tigramite.independence_tests.independence_tests_base &#8212; Tigramite 5.0 documentation</title>
<title>tigramite.independence_tests.independence_tests_base &#8212; Tigramite 5.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sphinxdoc.css" />
<script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
<script src="../../../_static/jquery.js"></script>
<script src="../../../_static/underscore.js"></script>
<script src="../../../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../../../_static/doctools.js"></script>
<link rel="index" title="Index" href="../../../genindex.html" />
<link rel="search" title="Search" href="../../../search.html" />
Expand All @@ -24,7 +25,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.independence_tests.independence_tests_base</a></li>
</ul>
Expand Down Expand Up @@ -1067,7 +1068,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -1081,14 +1082,14 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.independence_tests.independence_tests_base</a></li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
Original file line number Diff line number Diff line change
@@ -1,16 +1,17 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>tigramite.independence_tests.parcorr_mult &#8212; Tigramite 5.0 documentation</title>
<title>tigramite.independence_tests.parcorr_mult &#8212; Tigramite 5.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../../_static/sphinxdoc.css" />
<script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
<script src="../../../_static/jquery.js"></script>
<script src="../../../_static/underscore.js"></script>
<script src="../../../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../../../_static/doctools.js"></script>
<link rel="index" title="Index" href="../../../genindex.html" />
<link rel="search" title="Search" href="../../../search.html" />
Expand All @@ -24,7 +25,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.independence_tests.parcorr_mult</a></li>
</ul>
Expand Down Expand Up @@ -370,7 +371,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -384,14 +385,14 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.independence_tests.parcorr_mult</a></li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
15 changes: 8 additions & 7 deletions docs/_build/html/_modules/tigramite/models.html
Original file line number Diff line number Diff line change
@@ -1,16 +1,17 @@

<!DOCTYPE html>

<html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>tigramite.models &#8212; Tigramite 5.0 documentation</title>
<title>tigramite.models &#8212; Tigramite 5.1 documentation</title>
<link rel="stylesheet" type="text/css" href="../../_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="../../_static/sphinxdoc.css" />
<script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js"></script>
<script src="../../_static/jquery.js"></script>
<script src="../../_static/underscore.js"></script>
<script src="../../_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="../../_static/doctools.js"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
Expand All @@ -24,7 +25,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.models</a></li>
</ul>
Expand Down Expand Up @@ -1268,7 +1269,7 @@ <h1>Source code for tigramite.models</h1><div class="highlight"><pre>

<span class="c1"># Default value for the mask</span>
<span class="k">if</span> <span class="n">dataframe</span><span class="o">.</span><span class="n">mask</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
<span class="n">mask</span> <span class="o">=</span> <span class="n">dataframe</span><span class="o">.</span><span class="n">mask</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
<span class="n">mask</span> <span class="o">=</span> <span class="p">{</span><span class="mi">0</span><span class="p">:</span> <span class="n">dataframe</span><span class="o">.</span><span class="n">mask</span><span class="p">[</span><span class="mi">0</span><span class="p">]}</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">mask</span> <span class="o">=</span> <span class="p">{</span><span class="mi">0</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dataframe</span><span class="o">.</span><span class="n">values</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="s1">&#39;bool&#39;</span><span class="p">)}</span>
<span class="c1"># Get the dataframe shape</span>
Expand Down Expand Up @@ -1600,7 +1601,7 @@ <h3 id="searchlabel">Quick search</h3>
</form>
</div>
</div>
<script>$('#searchbox').show(0);</script>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
Expand All @@ -1614,14 +1615,14 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.0 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Tigramite 5.1 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
<li class="nav-item nav-item-this"><a href="">tigramite.models</a></li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2021, Jakob Runge.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.0.2.
</div>
</body>
</html>
Loading